Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02023

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02022 and MPMX26_02023 are separated by 54 nucleotidesMPMX26_02023 and MPMX26_02024 are separated by 148 nucleotides MPMX26_02022: MPMX26_02022 - Long-chain-fatty-acid--CoA ligase, at 2,087,041 to 2,088,759 _02022 MPMX26_02023: MPMX26_02023 - Acyl-CoA dehydrogenase, at 2,088,814 to 2,089,953 _02023 MPMX26_02024: MPMX26_02024 - C4-dicarboxylate transport protein 2, at 2,090,102 to 2,091,445 _02024 Position (kb) 2088 2089 2090Strain fitness (log2 ratio) -1 0 1 2at 2087.845 kb on - strand, within MPMX26_02022at 2088.946 kb on - strand, within MPMX26_02023at 2088.946 kb on - strand, within MPMX26_02023at 2088.946 kb on - strand, within MPMX26_02023at 2088.946 kb on - strand, within MPMX26_02023at 2088.946 kb on - strand, within MPMX26_02023at 2088.946 kb on - strand, within MPMX26_02023at 2089.096 kb on - strand, within MPMX26_02023at 2089.096 kb on - strand, within MPMX26_02023at 2089.096 kb on - strand, within MPMX26_02023at 2089.107 kb on - strand, within MPMX26_02023at 2089.149 kb on - strand, within MPMX26_02023at 2089.192 kb on - strand, within MPMX26_02023at 2089.197 kb on - strand, within MPMX26_02023at 2089.209 kb on - strand, within MPMX26_02023at 2089.272 kb on - strand, within MPMX26_02023at 2089.402 kb on - strand, within MPMX26_02023at 2089.426 kb on - strand, within MPMX26_02023at 2089.449 kb on - strand, within MPMX26_02023at 2089.459 kb on - strand, within MPMX26_02023at 2089.839 kb on - strand, within MPMX26_02023at 2089.880 kb on - strandat 2090.145 kb on - strandat 2090.199 kb on - strandat 2090.199 kb on - strandat 2090.217 kb on - strandat 2090.217 kb on - strandat 2090.217 kb on - strandat 2090.217 kb on - strandat 2090.217 kb on - strandat 2090.234 kb on - strandat 2090.246 kb on - strand, within MPMX26_02024at 2090.256 kb on - strand, within MPMX26_02024at 2090.256 kb on - strand, within MPMX26_02024at 2090.265 kb on - strand, within MPMX26_02024at 2090.265 kb on - strand, within MPMX26_02024at 2090.325 kb on - strand, within MPMX26_02024at 2090.327 kb on - strand, within MPMX26_02024at 2090.337 kb on - strand, within MPMX26_02024at 2090.359 kb on - strand, within MPMX26_02024at 2090.376 kb on - strand, within MPMX26_02024at 2090.405 kb on - strand, within MPMX26_02024at 2090.427 kb on - strand, within MPMX26_02024at 2090.429 kb on - strand, within MPMX26_02024at 2090.429 kb on - strand, within MPMX26_02024at 2090.439 kb on - strand, within MPMX26_02024at 2090.439 kb on - strand, within MPMX26_02024at 2090.457 kb on - strand, within MPMX26_02024at 2090.587 kb on - strand, within MPMX26_02024at 2090.587 kb on - strand, within MPMX26_02024at 2090.609 kb on - strand, within MPMX26_02024at 2090.609 kb on - strand, within MPMX26_02024at 2090.609 kb on - strand, within MPMX26_02024at 2090.609 kb on - strand, within MPMX26_02024at 2090.614 kb on - strand, within MPMX26_02024at 2090.614 kb on - strand, within MPMX26_02024at 2090.641 kb on - strand, within MPMX26_02024at 2090.645 kb on - strand, within MPMX26_02024at 2090.672 kb on - strand, within MPMX26_02024at 2090.672 kb on - strand, within MPMX26_02024at 2090.682 kb on - strand, within MPMX26_02024at 2090.682 kb on - strand, within MPMX26_02024at 2090.682 kb on - strand, within MPMX26_02024at 2090.739 kb on - strand, within MPMX26_02024at 2090.753 kb on - strand, within MPMX26_02024at 2090.760 kb on - strand, within MPMX26_02024at 2090.886 kb on - strand, within MPMX26_02024at 2090.891 kb on - strand, within MPMX26_02024at 2090.891 kb on - strand, within MPMX26_02024at 2090.904 kb on - strand, within MPMX26_02024at 2090.904 kb on - strand, within MPMX26_02024at 2090.919 kb on - strand, within MPMX26_02024at 2090.929 kb on - strand, within MPMX26_02024at 2090.934 kb on - strand, within MPMX26_02024at 2090.934 kb on - strand, within MPMX26_02024at 2090.934 kb on - strand, within MPMX26_02024at 2090.934 kb on - strand, within MPMX26_02024at 2090.934 kb on - strand, within MPMX26_02024at 2090.944 kb on - strand, within MPMX26_02024

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,087,845 - MPMX26_02022 0.47 -0.3
2,088,946 - MPMX26_02023 0.12 -1.4
2,088,946 - MPMX26_02023 0.12 -0.4
2,088,946 - MPMX26_02023 0.12 -0.1
2,088,946 - MPMX26_02023 0.12 +0.1
2,088,946 - MPMX26_02023 0.12 +1.1
2,088,946 - MPMX26_02023 0.12 +0.7
2,089,096 - MPMX26_02023 0.25 -1.4
2,089,096 - MPMX26_02023 0.25 -0.5
2,089,096 - MPMX26_02023 0.25 +0.5
2,089,107 - MPMX26_02023 0.26 -1.3
2,089,149 - MPMX26_02023 0.29 +0.8
2,089,192 - MPMX26_02023 0.33 +1.9
2,089,197 - MPMX26_02023 0.34 +0.1
2,089,209 - MPMX26_02023 0.35 +1.1
2,089,272 - MPMX26_02023 0.40 -0.4
2,089,402 - MPMX26_02023 0.52 +0.5
2,089,426 - MPMX26_02023 0.54 -0.5
2,089,449 - MPMX26_02023 0.56 -1.2
2,089,459 - MPMX26_02023 0.57 +1.5
2,089,839 - MPMX26_02023 0.90 -0.5
2,089,880 - +0.6
2,090,145 - +1.1
2,090,199 - +0.8
2,090,199 - +0.1
2,090,217 - -0.1
2,090,217 - +0.5
2,090,217 - +1.3
2,090,217 - +0.4
2,090,217 - +0.6
2,090,234 - +0.3
2,090,246 - MPMX26_02024 0.11 -0.3
2,090,256 - MPMX26_02024 0.11 -0.6
2,090,256 - MPMX26_02024 0.11 +0.2
2,090,265 - MPMX26_02024 0.12 +0.5
2,090,265 - MPMX26_02024 0.12 +0.4
2,090,325 - MPMX26_02024 0.17 -0.8
2,090,327 - MPMX26_02024 0.17 -1.2
2,090,337 - MPMX26_02024 0.17 -0.1
2,090,359 - MPMX26_02024 0.19 +0.2
2,090,376 - MPMX26_02024 0.20 -0.4
2,090,405 - MPMX26_02024 0.23 -0.8
2,090,427 - MPMX26_02024 0.24 -0.4
2,090,429 - MPMX26_02024 0.24 -0.0
2,090,429 - MPMX26_02024 0.24 +0.1
2,090,439 - MPMX26_02024 0.25 -0.3
2,090,439 - MPMX26_02024 0.25 +0.8
2,090,457 - MPMX26_02024 0.26 -0.3
2,090,587 - MPMX26_02024 0.36 -0.4
2,090,587 - MPMX26_02024 0.36 -0.2
2,090,609 - MPMX26_02024 0.38 +0.2
2,090,609 - MPMX26_02024 0.38 +0.4
2,090,609 - MPMX26_02024 0.38 -0.2
2,090,609 - MPMX26_02024 0.38 -0.2
2,090,614 - MPMX26_02024 0.38 -0.3
2,090,614 - MPMX26_02024 0.38 -0.5
2,090,641 - MPMX26_02024 0.40 +0.2
2,090,645 - MPMX26_02024 0.40 +0.1
2,090,672 - MPMX26_02024 0.42 +0.5
2,090,672 - MPMX26_02024 0.42 +0.3
2,090,682 - MPMX26_02024 0.43 +0.3
2,090,682 - MPMX26_02024 0.43 +0.6
2,090,682 - MPMX26_02024 0.43 +0.4
2,090,739 - MPMX26_02024 0.47 +2.4
2,090,753 - MPMX26_02024 0.48 -0.3
2,090,760 - MPMX26_02024 0.49 +0.5
2,090,886 - MPMX26_02024 0.58 +0.1
2,090,891 - MPMX26_02024 0.59 +0.3
2,090,891 - MPMX26_02024 0.59 +0.3
2,090,904 - MPMX26_02024 0.60 -0.0
2,090,904 - MPMX26_02024 0.60 +0.5
2,090,919 - MPMX26_02024 0.61 -0.9
2,090,929 - MPMX26_02024 0.62 -0.6
2,090,934 - MPMX26_02024 0.62 +0.3
2,090,934 - MPMX26_02024 0.62 +0.3
2,090,934 - MPMX26_02024 0.62 -0.3
2,090,934 - MPMX26_02024 0.62 -0.3
2,090,934 - MPMX26_02024 0.62 +0.2
2,090,944 - MPMX26_02024 0.63 +0.3

Or see this region's nucleotide sequence