Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02013 and MPMX26_02014 are separated by 152 nucleotides MPMX26_02014 and MPMX26_02015 are separated by 182 nucleotides MPMX26_02015 and MPMX26_02016 are separated by 49 nucleotides MPMX26_02016 and MPMX26_02017 are separated by 122 nucleotides
MPMX26_02013: MPMX26_02013 - Alkyl hydroperoxide reductase subunit F, at 2,077,406 to 2,078,971
_02013
MPMX26_02014: MPMX26_02014 - hypothetical protein, at 2,079,124 to 2,079,483
_02014
MPMX26_02015: MPMX26_02015 - hypothetical protein, at 2,079,666 to 2,080,049
_02015
MPMX26_02016: MPMX26_02016 - hypothetical protein, at 2,080,099 to 2,080,716
_02016
MPMX26_02017: MPMX26_02017 - Peroxide stress resistance protein YaaA, at 2,080,839 to 2,081,618
_02017
Position (kb)
2079
2080
2081 Strain fitness (log2 ratio)
-1
0
1 at 2078.674 kb on + strand, within MPMX26_02013 at 2078.708 kb on + strand, within MPMX26_02013 at 2078.708 kb on + strand, within MPMX26_02013 at 2079.451 kb on + strand at 2079.704 kb on + strand at 2079.711 kb on + strand, within MPMX26_02015 at 2079.762 kb on + strand, within MPMX26_02015 at 2079.773 kb on + strand, within MPMX26_02015 at 2079.773 kb on + strand, within MPMX26_02015 at 2079.773 kb on + strand, within MPMX26_02015 at 2079.773 kb on + strand, within MPMX26_02015 at 2079.780 kb on + strand, within MPMX26_02015 at 2079.852 kb on + strand, within MPMX26_02015 at 2079.866 kb on + strand, within MPMX26_02015 at 2079.866 kb on + strand, within MPMX26_02015 at 2079.870 kb on + strand, within MPMX26_02015 at 2079.876 kb on + strand, within MPMX26_02015 at 2079.876 kb on + strand, within MPMX26_02015 at 2079.935 kb on + strand, within MPMX26_02015 at 2079.935 kb on + strand, within MPMX26_02015 at 2079.935 kb on + strand, within MPMX26_02015 at 2079.943 kb on + strand, within MPMX26_02015 at 2079.943 kb on + strand, within MPMX26_02015 at 2079.992 kb on + strand, within MPMX26_02015 at 2079.994 kb on + strand, within MPMX26_02015 at 2079.996 kb on + strand, within MPMX26_02015 at 2079.996 kb on + strand, within MPMX26_02015 at 2079.996 kb on + strand, within MPMX26_02015 at 2080.016 kb on + strand at 2080.028 kb on + strand at 2080.028 kb on + strand at 2080.028 kb on + strand at 2080.028 kb on + strand at 2080.028 kb on + strand at 2080.224 kb on - strand, within MPMX26_02016
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 2,078,674 + MPMX26_02013 0.81 +0.1 2,078,708 + MPMX26_02013 0.83 +1.1 2,078,708 + MPMX26_02013 0.83 +0.8 2,079,451 + +1.5 2,079,704 + +0.3 2,079,711 + MPMX26_02015 0.12 +0.8 2,079,762 + MPMX26_02015 0.25 +1.5 2,079,773 + MPMX26_02015 0.28 +0.2 2,079,773 + MPMX26_02015 0.28 +0.4 2,079,773 + MPMX26_02015 0.28 +0.3 2,079,773 + MPMX26_02015 0.28 -0.5 2,079,780 + MPMX26_02015 0.30 +0.5 2,079,852 + MPMX26_02015 0.48 +0.2 2,079,866 + MPMX26_02015 0.52 +0.7 2,079,866 + MPMX26_02015 0.52 +0.3 2,079,870 + MPMX26_02015 0.53 +0.2 2,079,876 + MPMX26_02015 0.55 +0.4 2,079,876 + MPMX26_02015 0.55 -0.0 2,079,935 + MPMX26_02015 0.70 +0.5 2,079,935 + MPMX26_02015 0.70 +0.5 2,079,935 + MPMX26_02015 0.70 +0.7 2,079,943 + MPMX26_02015 0.72 -0.4 2,079,943 + MPMX26_02015 0.72 -0.9 2,079,992 + MPMX26_02015 0.85 +0.2 2,079,994 + MPMX26_02015 0.85 +0.8 2,079,996 + MPMX26_02015 0.86 +0.2 2,079,996 + MPMX26_02015 0.86 -0.8 2,079,996 + MPMX26_02015 0.86 -0.1 2,080,016 + +0.6 2,080,028 + +0.3 2,080,028 + +0.1 2,080,028 + +0.4 2,080,028 + +0.7 2,080,028 + +0.6 2,080,224 - MPMX26_02016 0.20 +0.8
Or see this region's nucleotide sequence