Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01501

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01499 and MPMX26_01500 overlap by 4 nucleotidesMPMX26_01500 and MPMX26_01501 are separated by 21 nucleotidesMPMX26_01501 and MPMX26_01502 are separated by 18 nucleotides MPMX26_01499: MPMX26_01499 - Methylthioribulose-1-phosphate dehydratase, at 1,559,581 to 1,560,336 _01499 MPMX26_01500: MPMX26_01500 - Glyoxylate/hydroxypyruvate reductase A, at 1,560,333 to 1,561,256 _01500 MPMX26_01501: MPMX26_01501 - 1,2-epoxyphenylacetyl-CoA isomerase, at 1,561,278 to 1,562,069 _01501 MPMX26_01502: MPMX26_01502 - NADH:quinone reductase, at 1,562,088 to 1,563,074 _01502 Position (kb) 1561 1562 1563Strain fitness (log2 ratio) -1 0 1at 1562.148 kb on + strandat 1562.528 kb on - strand, within MPMX26_01502at 1563.033 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,562,148 + +0.8
1,562,528 - MPMX26_01502 0.45 +0.2
1,563,033 + -0.0

Or see this region's nucleotide sequence