Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01493 and MPMX26_01494 are separated by 120 nucleotides MPMX26_01494 and MPMX26_01495 are separated by 300 nucleotides MPMX26_01495 and MPMX26_01496 are separated by 58 nucleotides
MPMX26_01493: MPMX26_01493 - putative sulfate transporter, at 1,550,490 to 1,552,232
_01493
MPMX26_01494: MPMX26_01494 - Biofilm growth-associated repressor, at 1,552,353 to 1,552,661
_01494
MPMX26_01495: MPMX26_01495 - DNA protection during starvation protein 2, at 1,552,962 to 1,553,453
_01495
MPMX26_01496: MPMX26_01496 - hypothetical protein, at 1,553,512 to 1,555,374
_01496
Position (kb)
1552
1553 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1552.214 kb on - strand at 1552.391 kb on - strand, within MPMX26_01494 at 1552.443 kb on - strand, within MPMX26_01494 at 1552.455 kb on - strand, within MPMX26_01494 at 1552.464 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.590 kb on - strand, within MPMX26_01494 at 1552.613 kb on - strand, within MPMX26_01494 at 1552.613 kb on - strand, within MPMX26_01494 at 1553.037 kb on + strand, within MPMX26_01495 at 1553.037 kb on + strand, within MPMX26_01495 at 1553.037 kb on + strand, within MPMX26_01495 at 1553.060 kb on + strand, within MPMX26_01495 at 1553.103 kb on + strand, within MPMX26_01495 at 1553.109 kb on + strand, within MPMX26_01495 at 1553.115 kb on + strand, within MPMX26_01495 at 1553.150 kb on + strand, within MPMX26_01495 at 1553.150 kb on + strand, within MPMX26_01495 at 1553.150 kb on + strand, within MPMX26_01495 at 1553.150 kb on + strand, within MPMX26_01495 at 1553.150 kb on + strand, within MPMX26_01495 at 1553.150 kb on + strand, within MPMX26_01495 at 1553.150 kb on + strand, within MPMX26_01495 at 1553.157 kb on + strand, within MPMX26_01495 at 1553.226 kb on + strand, within MPMX26_01495 at 1553.234 kb on + strand, within MPMX26_01495 at 1553.310 kb on + strand, within MPMX26_01495 at 1553.310 kb on + strand, within MPMX26_01495 at 1553.315 kb on + strand, within MPMX26_01495 at 1553.330 kb on + strand, within MPMX26_01495 at 1553.435 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 1,552,214 - +0.9 1,552,391 - MPMX26_01494 0.12 -1.3 1,552,443 - MPMX26_01494 0.29 +0.8 1,552,455 - MPMX26_01494 0.33 -0.1 1,552,464 - MPMX26_01494 0.36 +0.2 1,552,590 - MPMX26_01494 0.77 +0.3 1,552,590 - MPMX26_01494 0.77 +0.1 1,552,590 - MPMX26_01494 0.77 +0.2 1,552,590 - MPMX26_01494 0.77 -0.2 1,552,590 - MPMX26_01494 0.77 -0.2 1,552,590 - MPMX26_01494 0.77 -0.3 1,552,590 - MPMX26_01494 0.77 -0.5 1,552,590 - MPMX26_01494 0.77 +0.4 1,552,590 - MPMX26_01494 0.77 +0.2 1,552,590 - MPMX26_01494 0.77 +0.2 1,552,613 - MPMX26_01494 0.84 -1.2 1,552,613 - MPMX26_01494 0.84 -0.5 1,553,037 + MPMX26_01495 0.15 +0.6 1,553,037 + MPMX26_01495 0.15 +0.8 1,553,037 + MPMX26_01495 0.15 +0.4 1,553,060 + MPMX26_01495 0.20 +0.9 1,553,103 + MPMX26_01495 0.29 -0.1 1,553,109 + MPMX26_01495 0.30 -0.1 1,553,115 + MPMX26_01495 0.31 +3.3 1,553,150 + MPMX26_01495 0.38 +0.4 1,553,150 + MPMX26_01495 0.38 -0.5 1,553,150 + MPMX26_01495 0.38 -0.4 1,553,150 + MPMX26_01495 0.38 +0.3 1,553,150 + MPMX26_01495 0.38 -0.9 1,553,150 + MPMX26_01495 0.38 -0.3 1,553,150 + MPMX26_01495 0.38 +0.7 1,553,157 + MPMX26_01495 0.40 -0.7 1,553,226 + MPMX26_01495 0.54 +1.7 1,553,234 + MPMX26_01495 0.55 -0.3 1,553,310 + MPMX26_01495 0.71 +1.5 1,553,310 + MPMX26_01495 0.71 +0.6 1,553,315 + MPMX26_01495 0.72 +0.1 1,553,330 + MPMX26_01495 0.75 +0.3 1,553,435 + +0.7
Or see this region's nucleotide sequence