Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01494

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01493 and MPMX26_01494 are separated by 120 nucleotidesMPMX26_01494 and MPMX26_01495 are separated by 300 nucleotidesMPMX26_01495 and MPMX26_01496 are separated by 58 nucleotides MPMX26_01493: MPMX26_01493 - putative sulfate transporter, at 1,550,490 to 1,552,232 _01493 MPMX26_01494: MPMX26_01494 - Biofilm growth-associated repressor, at 1,552,353 to 1,552,661 _01494 MPMX26_01495: MPMX26_01495 - DNA protection during starvation protein 2, at 1,552,962 to 1,553,453 _01495 MPMX26_01496: MPMX26_01496 - hypothetical protein, at 1,553,512 to 1,555,374 _01496 Position (kb) 1552 1553Strain fitness (log2 ratio) -1 0 1 2 3at 1552.214 kb on - strandat 1552.391 kb on - strand, within MPMX26_01494at 1552.443 kb on - strand, within MPMX26_01494at 1552.455 kb on - strand, within MPMX26_01494at 1552.464 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.590 kb on - strand, within MPMX26_01494at 1552.613 kb on - strand, within MPMX26_01494at 1552.613 kb on - strand, within MPMX26_01494at 1553.037 kb on + strand, within MPMX26_01495at 1553.037 kb on + strand, within MPMX26_01495at 1553.037 kb on + strand, within MPMX26_01495at 1553.060 kb on + strand, within MPMX26_01495at 1553.103 kb on + strand, within MPMX26_01495at 1553.109 kb on + strand, within MPMX26_01495at 1553.115 kb on + strand, within MPMX26_01495at 1553.150 kb on + strand, within MPMX26_01495at 1553.150 kb on + strand, within MPMX26_01495at 1553.150 kb on + strand, within MPMX26_01495at 1553.150 kb on + strand, within MPMX26_01495at 1553.150 kb on + strand, within MPMX26_01495at 1553.150 kb on + strand, within MPMX26_01495at 1553.150 kb on + strand, within MPMX26_01495at 1553.157 kb on + strand, within MPMX26_01495at 1553.226 kb on + strand, within MPMX26_01495at 1553.234 kb on + strand, within MPMX26_01495at 1553.310 kb on + strand, within MPMX26_01495at 1553.310 kb on + strand, within MPMX26_01495at 1553.315 kb on + strand, within MPMX26_01495at 1553.330 kb on + strand, within MPMX26_01495at 1553.435 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,552,214 - +0.9
1,552,391 - MPMX26_01494 0.12 -1.3
1,552,443 - MPMX26_01494 0.29 +0.8
1,552,455 - MPMX26_01494 0.33 -0.1
1,552,464 - MPMX26_01494 0.36 +0.2
1,552,590 - MPMX26_01494 0.77 +0.3
1,552,590 - MPMX26_01494 0.77 +0.1
1,552,590 - MPMX26_01494 0.77 +0.2
1,552,590 - MPMX26_01494 0.77 -0.2
1,552,590 - MPMX26_01494 0.77 -0.2
1,552,590 - MPMX26_01494 0.77 -0.3
1,552,590 - MPMX26_01494 0.77 -0.5
1,552,590 - MPMX26_01494 0.77 +0.4
1,552,590 - MPMX26_01494 0.77 +0.2
1,552,590 - MPMX26_01494 0.77 +0.2
1,552,613 - MPMX26_01494 0.84 -1.2
1,552,613 - MPMX26_01494 0.84 -0.5
1,553,037 + MPMX26_01495 0.15 +0.6
1,553,037 + MPMX26_01495 0.15 +0.8
1,553,037 + MPMX26_01495 0.15 +0.4
1,553,060 + MPMX26_01495 0.20 +0.9
1,553,103 + MPMX26_01495 0.29 -0.1
1,553,109 + MPMX26_01495 0.30 -0.1
1,553,115 + MPMX26_01495 0.31 +3.3
1,553,150 + MPMX26_01495 0.38 +0.4
1,553,150 + MPMX26_01495 0.38 -0.5
1,553,150 + MPMX26_01495 0.38 -0.4
1,553,150 + MPMX26_01495 0.38 +0.3
1,553,150 + MPMX26_01495 0.38 -0.9
1,553,150 + MPMX26_01495 0.38 -0.3
1,553,150 + MPMX26_01495 0.38 +0.7
1,553,157 + MPMX26_01495 0.40 -0.7
1,553,226 + MPMX26_01495 0.54 +1.7
1,553,234 + MPMX26_01495 0.55 -0.3
1,553,310 + MPMX26_01495 0.71 +1.5
1,553,310 + MPMX26_01495 0.71 +0.6
1,553,315 + MPMX26_01495 0.72 +0.1
1,553,330 + MPMX26_01495 0.75 +0.3
1,553,435 + +0.7

Or see this region's nucleotide sequence