Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01461

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01460 and MPMX26_01461 are separated by 91 nucleotidesMPMX26_01461 and MPMX26_01462 are separated by 20 nucleotides MPMX26_01460: MPMX26_01460 - PCP degradation transcriptional activation protein, at 1,510,838 to 1,511,758 _01460 MPMX26_01461: MPMX26_01461 - (R)-benzylsuccinyl-CoA dehydrogenase, at 1,511,850 to 1,513,091 _01461 MPMX26_01462: MPMX26_01462 - hypothetical protein, at 1,513,112 to 1,514,233 _01462 Position (kb) 1511 1512 1513 1514Strain fitness (log2 ratio) -2 -1 0 1at 1510.943 kb on + strand, within MPMX26_01460at 1511.176 kb on - strand, within MPMX26_01460at 1511.861 kb on + strandat 1511.861 kb on + strandat 1511.861 kb on + strandat 1511.992 kb on + strand, within MPMX26_01461at 1511.992 kb on + strand, within MPMX26_01461at 1511.992 kb on + strand, within MPMX26_01461at 1511.992 kb on + strand, within MPMX26_01461at 1511.992 kb on + strand, within MPMX26_01461at 1512.000 kb on + strand, within MPMX26_01461at 1512.002 kb on + strand, within MPMX26_01461at 1512.050 kb on + strand, within MPMX26_01461at 1512.073 kb on + strand, within MPMX26_01461at 1512.073 kb on + strand, within MPMX26_01461at 1512.073 kb on + strand, within MPMX26_01461at 1512.087 kb on + strand, within MPMX26_01461at 1512.087 kb on + strand, within MPMX26_01461at 1512.092 kb on + strand, within MPMX26_01461at 1512.092 kb on + strand, within MPMX26_01461at 1512.092 kb on + strand, within MPMX26_01461at 1512.106 kb on + strand, within MPMX26_01461at 1512.121 kb on + strand, within MPMX26_01461at 1512.121 kb on + strand, within MPMX26_01461at 1512.136 kb on + strand, within MPMX26_01461at 1512.144 kb on + strand, within MPMX26_01461at 1512.165 kb on + strand, within MPMX26_01461at 1512.180 kb on + strand, within MPMX26_01461at 1512.185 kb on + strand, within MPMX26_01461at 1512.243 kb on + strand, within MPMX26_01461at 1512.269 kb on + strand, within MPMX26_01461at 1512.323 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.372 kb on + strand, within MPMX26_01461at 1512.418 kb on + strand, within MPMX26_01461at 1512.418 kb on + strand, within MPMX26_01461at 1512.444 kb on + strand, within MPMX26_01461at 1512.470 kb on + strand, within MPMX26_01461at 1512.553 kb on + strand, within MPMX26_01461at 1512.568 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.600 kb on + strand, within MPMX26_01461at 1512.623 kb on + strand, within MPMX26_01461at 1512.643 kb on + strand, within MPMX26_01461at 1512.648 kb on + strand, within MPMX26_01461at 1512.664 kb on + strand, within MPMX26_01461at 1512.664 kb on + strand, within MPMX26_01461at 1512.665 kb on + strand, within MPMX26_01461at 1512.665 kb on + strand, within MPMX26_01461at 1512.713 kb on + strand, within MPMX26_01461at 1512.909 kb on + strand, within MPMX26_01461at 1512.939 kb on + strand, within MPMX26_01461at 1512.986 kb on + strandat 1513.023 kb on + strandat 1513.023 kb on + strandat 1513.025 kb on + strandat 1513.045 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,510,943 + MPMX26_01460 0.11 -0.2
1,511,176 - MPMX26_01460 0.37 +0.8
1,511,861 + -0.4
1,511,861 + -0.0
1,511,861 + +0.2
1,511,992 + MPMX26_01461 0.11 +0.7
1,511,992 + MPMX26_01461 0.11 +0.7
1,511,992 + MPMX26_01461 0.11 +0.2
1,511,992 + MPMX26_01461 0.11 -0.1
1,511,992 + MPMX26_01461 0.11 -0.4
1,512,000 + MPMX26_01461 0.12 -1.4
1,512,002 + MPMX26_01461 0.12 -1.0
1,512,050 + MPMX26_01461 0.16 -0.5
1,512,073 + MPMX26_01461 0.18 -0.0
1,512,073 + MPMX26_01461 0.18 +0.6
1,512,073 + MPMX26_01461 0.18 +0.0
1,512,087 + MPMX26_01461 0.19 +0.6
1,512,087 + MPMX26_01461 0.19 +0.2
1,512,092 + MPMX26_01461 0.19 +0.3
1,512,092 + MPMX26_01461 0.19 -0.1
1,512,092 + MPMX26_01461 0.19 +0.3
1,512,106 + MPMX26_01461 0.21 -0.2
1,512,121 + MPMX26_01461 0.22 +1.4
1,512,121 + MPMX26_01461 0.22 +0.4
1,512,136 + MPMX26_01461 0.23 -0.6
1,512,144 + MPMX26_01461 0.24 +0.2
1,512,165 + MPMX26_01461 0.25 -0.1
1,512,180 + MPMX26_01461 0.27 +0.2
1,512,185 + MPMX26_01461 0.27 +0.1
1,512,243 + MPMX26_01461 0.32 -0.4
1,512,269 + MPMX26_01461 0.34 +0.3
1,512,323 + MPMX26_01461 0.38 +0.2
1,512,372 + MPMX26_01461 0.42 -0.3
1,512,372 + MPMX26_01461 0.42 +0.4
1,512,372 + MPMX26_01461 0.42 +0.8
1,512,372 + MPMX26_01461 0.42 -0.5
1,512,372 + MPMX26_01461 0.42 +0.3
1,512,372 + MPMX26_01461 0.42 -0.4
1,512,372 + MPMX26_01461 0.42 +1.6
1,512,372 + MPMX26_01461 0.42 -0.5
1,512,372 + MPMX26_01461 0.42 +0.3
1,512,418 + MPMX26_01461 0.46 -0.1
1,512,418 + MPMX26_01461 0.46 +0.1
1,512,444 + MPMX26_01461 0.48 +0.3
1,512,470 + MPMX26_01461 0.50 -0.2
1,512,553 + MPMX26_01461 0.57 -1.2
1,512,568 + MPMX26_01461 0.58 +0.2
1,512,600 + MPMX26_01461 0.60 -0.2
1,512,600 + MPMX26_01461 0.60 +0.3
1,512,600 + MPMX26_01461 0.60 -0.3
1,512,600 + MPMX26_01461 0.60 +0.4
1,512,600 + MPMX26_01461 0.60 +0.2
1,512,600 + MPMX26_01461 0.60 -0.5
1,512,600 + MPMX26_01461 0.60 +0.3
1,512,600 + MPMX26_01461 0.60 -1.3
1,512,600 + MPMX26_01461 0.60 -0.9
1,512,600 + MPMX26_01461 0.60 +0.3
1,512,600 + MPMX26_01461 0.60 -0.5
1,512,600 + MPMX26_01461 0.60 +0.0
1,512,623 + MPMX26_01461 0.62 -0.8
1,512,643 + MPMX26_01461 0.64 -0.2
1,512,648 + MPMX26_01461 0.64 -0.1
1,512,664 + MPMX26_01461 0.66 +1.0
1,512,664 + MPMX26_01461 0.66 -0.1
1,512,665 + MPMX26_01461 0.66 -0.6
1,512,665 + MPMX26_01461 0.66 -0.2
1,512,713 + MPMX26_01461 0.69 -1.9
1,512,909 + MPMX26_01461 0.85 -1.1
1,512,939 + MPMX26_01461 0.88 -0.3
1,512,986 + -0.2
1,513,023 + +0.9
1,513,023 + +0.2
1,513,025 + -1.1
1,513,045 + +0.4

Or see this region's nucleotide sequence