Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01249 and MPMX26_01250 are separated by 52 nucleotides MPMX26_01250 and MPMX26_01251 are separated by 256 nucleotides
MPMX26_01249: MPMX26_01249 - HTH-type transcriptional regulator HdfR, at 1,321,018 to 1,321,962
_01249
MPMX26_01250: MPMX26_01250 - hypothetical protein, at 1,322,015 to 1,323,142
_01250
MPMX26_01251: MPMX26_01251 - Lipoyl synthase, at 1,323,399 to 1,324,382
_01251
Position (kb)
1322
1323
1324 Strain fitness (log2 ratio)
-2
-1
0
1 at 1321.093 kb on + strand at 1321.093 kb on + strand at 1321.150 kb on + strand, within MPMX26_01249 at 1321.152 kb on + strand, within MPMX26_01249 at 1321.225 kb on + strand, within MPMX26_01249 at 1321.245 kb on + strand, within MPMX26_01249 at 1321.273 kb on + strand, within MPMX26_01249 at 1321.273 kb on + strand, within MPMX26_01249 at 1321.368 kb on + strand, within MPMX26_01249 at 1321.409 kb on + strand, within MPMX26_01249 at 1321.417 kb on + strand, within MPMX26_01249 at 1321.435 kb on + strand, within MPMX26_01249 at 1321.495 kb on + strand, within MPMX26_01249 at 1321.495 kb on + strand, within MPMX26_01249 at 1321.519 kb on + strand, within MPMX26_01249 at 1321.614 kb on + strand, within MPMX26_01249 at 1321.677 kb on + strand, within MPMX26_01249 at 1321.689 kb on + strand, within MPMX26_01249 at 1321.803 kb on + strand, within MPMX26_01249 at 1321.803 kb on + strand, within MPMX26_01249 at 1321.830 kb on + strand, within MPMX26_01249 at 1322.335 kb on + strand, within MPMX26_01250 at 1322.889 kb on + strand, within MPMX26_01250 at 1324.082 kb on - strand, within MPMX26_01251
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 1,321,093 + -1.0 1,321,093 + -0.0 1,321,150 + MPMX26_01249 0.14 -1.0 1,321,152 + MPMX26_01249 0.14 -0.5 1,321,225 + MPMX26_01249 0.22 +0.5 1,321,245 + MPMX26_01249 0.24 -2.7 1,321,273 + MPMX26_01249 0.27 -0.4 1,321,273 + MPMX26_01249 0.27 -1.0 1,321,368 + MPMX26_01249 0.37 -0.5 1,321,409 + MPMX26_01249 0.41 -0.5 1,321,417 + MPMX26_01249 0.42 -1.3 1,321,435 + MPMX26_01249 0.44 -0.4 1,321,495 + MPMX26_01249 0.50 +0.9 1,321,495 + MPMX26_01249 0.50 -0.1 1,321,519 + MPMX26_01249 0.53 -1.2 1,321,614 + MPMX26_01249 0.63 -0.8 1,321,677 + MPMX26_01249 0.70 +1.1 1,321,689 + MPMX26_01249 0.71 -0.2 1,321,803 + MPMX26_01249 0.83 +1.4 1,321,803 + MPMX26_01249 0.83 -0.5 1,321,830 + MPMX26_01249 0.86 -0.2 1,322,335 + MPMX26_01250 0.28 -0.9 1,322,889 + MPMX26_01250 0.77 -1.8 1,324,082 - MPMX26_01251 0.69 +0.0
Or see this region's nucleotide sequence