Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00288

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00287 and MPMX26_00288 are separated by 234 nucleotidesMPMX26_00288 and MPMX26_00289 are separated by 257 nucleotidesMPMX26_00289 and MPMX26_00290 are separated by 51 nucleotides MPMX26_00287: MPMX26_00287 - Magnesium and cobalt efflux protein CorC, at 318,207 to 319,046 _00287 MPMX26_00288: MPMX26_00288 - hypothetical protein, at 319,281 to 320,402 _00288 MPMX26_00289: MPMX26_00289 - Sulfur carrier protein TusA, at 320,660 to 320,917 _00289 MPMX26_00290: MPMX26_00290 - Arginine exporter protein ArgO, at 320,969 to 321,523 _00290 Position (kb) 319 320 321Strain fitness (log2 ratio) -3 -2 -1 0 1at 318.553 kb on - strand, within MPMX26_00287at 318.596 kb on - strand, within MPMX26_00287at 318.596 kb on - strand, within MPMX26_00287at 318.601 kb on - strand, within MPMX26_00287at 318.623 kb on - strand, within MPMX26_00287at 318.705 kb on - strand, within MPMX26_00287at 318.711 kb on - strand, within MPMX26_00287at 318.738 kb on - strand, within MPMX26_00287at 318.738 kb on - strand, within MPMX26_00287at 318.746 kb on - strand, within MPMX26_00287at 318.782 kb on - strand, within MPMX26_00287at 318.800 kb on - strand, within MPMX26_00287at 318.800 kb on - strand, within MPMX26_00287at 318.800 kb on - strand, within MPMX26_00287at 318.834 kb on - strand, within MPMX26_00287at 318.848 kb on - strand, within MPMX26_00287at 318.857 kb on - strand, within MPMX26_00287at 318.866 kb on - strand, within MPMX26_00287at 318.867 kb on - strand, within MPMX26_00287at 318.898 kb on - strand, within MPMX26_00287at 318.927 kb on - strand, within MPMX26_00287at 318.927 kb on - strand, within MPMX26_00287at 318.927 kb on - strand, within MPMX26_00287at 318.963 kb on - strandat 318.963 kb on - strandat 318.963 kb on - strandat 318.996 kb on - strandat 318.996 kb on - strandat 318.998 kb on - strandat 319.026 kb on - strandat 319.026 kb on - strandat 319.026 kb on - strandat 319.026 kb on - strandat 319.060 kb on - strandat 319.110 kb on - strandat 319.110 kb on - strandat 319.315 kb on - strandat 319.316 kb on - strandat 319.316 kb on - strandat 319.316 kb on - strandat 319.316 kb on - strandat 319.347 kb on - strandat 319.433 kb on - strand, within MPMX26_00288at 319.433 kb on - strand, within MPMX26_00288at 319.438 kb on - strand, within MPMX26_00288at 319.438 kb on - strand, within MPMX26_00288at 319.448 kb on - strand, within MPMX26_00288at 319.469 kb on - strand, within MPMX26_00288at 319.469 kb on - strand, within MPMX26_00288at 319.469 kb on - strand, within MPMX26_00288at 319.477 kb on - strand, within MPMX26_00288at 319.477 kb on - strand, within MPMX26_00288at 319.479 kb on - strand, within MPMX26_00288at 319.479 kb on - strand, within MPMX26_00288at 319.479 kb on - strand, within MPMX26_00288at 319.479 kb on - strand, within MPMX26_00288at 319.484 kb on - strand, within MPMX26_00288at 319.507 kb on - strand, within MPMX26_00288at 319.612 kb on - strand, within MPMX26_00288at 319.625 kb on - strand, within MPMX26_00288at 319.668 kb on - strand, within MPMX26_00288at 320.037 kb on - strand, within MPMX26_00288at 320.037 kb on - strand, within MPMX26_00288at 320.093 kb on - strand, within MPMX26_00288at 320.912 kb on + strandat 320.912 kb on + strandat 320.912 kb on + strandat 320.912 kb on + strandat 320.912 kb on + strandat 320.912 kb on + strandat 320.912 kb on + strandat 320.921 kb on + strandat 320.947 kb on + strandat 320.947 kb on + strandat 320.948 kb on + strandat 320.948 kb on + strandat 320.948 kb on + strandat 321.038 kb on + strand, within MPMX26_00290at 321.038 kb on + strand, within MPMX26_00290at 321.038 kb on + strand, within MPMX26_00290at 321.055 kb on + strand, within MPMX26_00290at 321.055 kb on + strand, within MPMX26_00290at 321.055 kb on + strand, within MPMX26_00290at 321.055 kb on + strand, within MPMX26_00290at 321.055 kb on + strand, within MPMX26_00290at 321.060 kb on + strand, within MPMX26_00290at 321.070 kb on + strand, within MPMX26_00290at 321.083 kb on + strand, within MPMX26_00290at 321.100 kb on + strand, within MPMX26_00290at 321.100 kb on + strand, within MPMX26_00290at 321.119 kb on + strand, within MPMX26_00290at 321.119 kb on + strand, within MPMX26_00290at 321.119 kb on + strand, within MPMX26_00290at 321.165 kb on + strand, within MPMX26_00290at 321.180 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.190 kb on + strand, within MPMX26_00290at 321.195 kb on + strand, within MPMX26_00290at 321.195 kb on + strand, within MPMX26_00290at 321.195 kb on + strand, within MPMX26_00290at 321.195 kb on + strand, within MPMX26_00290at 321.200 kb on + strand, within MPMX26_00290at 321.209 kb on + strand, within MPMX26_00290at 321.209 kb on + strand, within MPMX26_00290at 321.244 kb on + strand, within MPMX26_00290at 321.249 kb on + strand, within MPMX26_00290at 321.249 kb on + strand, within MPMX26_00290at 321.250 kb on + strand, within MPMX26_00290at 321.252 kb on + strand, within MPMX26_00290at 321.254 kb on + strand, within MPMX26_00290at 321.254 kb on + strand, within MPMX26_00290at 321.254 kb on + strand, within MPMX26_00290at 321.254 kb on + strand, within MPMX26_00290at 321.254 kb on + strand, within MPMX26_00290at 321.254 kb on + strand, within MPMX26_00290at 321.264 kb on + strand, within MPMX26_00290at 321.306 kb on + strand, within MPMX26_00290at 321.306 kb on + strand, within MPMX26_00290at 321.311 kb on + strand, within MPMX26_00290at 321.316 kb on + strand, within MPMX26_00290at 321.316 kb on + strand, within MPMX26_00290at 321.321 kb on + strand, within MPMX26_00290at 321.342 kb on + strand, within MPMX26_00290at 321.353 kb on + strand, within MPMX26_00290at 321.371 kb on + strand, within MPMX26_00290

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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318,553 - MPMX26_00287 0.41 +0.8
318,596 - MPMX26_00287 0.46 -0.2
318,596 - MPMX26_00287 0.46 +1.1
318,601 - MPMX26_00287 0.47 -0.4
318,623 - MPMX26_00287 0.50 +0.8
318,705 - MPMX26_00287 0.59 +0.3
318,711 - MPMX26_00287 0.60 +0.6
318,738 - MPMX26_00287 0.63 +0.6
318,738 - MPMX26_00287 0.63 +0.3
318,746 - MPMX26_00287 0.64 +0.9
318,782 - MPMX26_00287 0.68 +0.7
318,800 - MPMX26_00287 0.71 +0.3
318,800 - MPMX26_00287 0.71 +0.8
318,800 - MPMX26_00287 0.71 +0.2
318,834 - MPMX26_00287 0.75 -0.0
318,848 - MPMX26_00287 0.76 +1.5
318,857 - MPMX26_00287 0.77 +0.8
318,866 - MPMX26_00287 0.78 -0.3
318,867 - MPMX26_00287 0.79 +0.6
318,898 - MPMX26_00287 0.82 +0.7
318,927 - MPMX26_00287 0.86 +0.0
318,927 - MPMX26_00287 0.86 +0.9
318,927 - MPMX26_00287 0.86 +1.0
318,963 - +0.3
318,963 - +0.6
318,963 - +0.5
318,996 - -0.0
318,996 - +0.8
318,998 - +0.5
319,026 - +0.4
319,026 - +0.3
319,026 - +0.5
319,026 - +0.7
319,060 - +0.5
319,110 - +0.3
319,110 - +0.7
319,315 - +0.4
319,316 - +0.5
319,316 - -1.1
319,316 - -0.0
319,316 - -0.1
319,347 - -1.5
319,433 - MPMX26_00288 0.14 -0.1
319,433 - MPMX26_00288 0.14 -1.2
319,438 - MPMX26_00288 0.14 +0.1
319,438 - MPMX26_00288 0.14 -1.4
319,448 - MPMX26_00288 0.15 +0.2
319,469 - MPMX26_00288 0.17 +0.5
319,469 - MPMX26_00288 0.17 -0.2
319,469 - MPMX26_00288 0.17 +1.4
319,477 - MPMX26_00288 0.17 +0.3
319,477 - MPMX26_00288 0.17 -0.7
319,479 - MPMX26_00288 0.18 -0.9
319,479 - MPMX26_00288 0.18 -2.0
319,479 - MPMX26_00288 0.18 -1.4
319,479 - MPMX26_00288 0.18 -0.5
319,484 - MPMX26_00288 0.18 -1.1
319,507 - MPMX26_00288 0.20 +0.3
319,612 - MPMX26_00288 0.30 +0.3
319,625 - MPMX26_00288 0.31 +0.7
319,668 - MPMX26_00288 0.34 -0.0
320,037 - MPMX26_00288 0.67 +0.3
320,037 - MPMX26_00288 0.67 -3.2
320,093 - MPMX26_00288 0.72 -2.0
320,912 + +1.6
320,912 + +0.7
320,912 + -1.0
320,912 + -0.1
320,912 + -1.0
320,912 + -0.4
320,912 + -0.4
320,921 + +0.2
320,947 + -0.4
320,947 + +0.2
320,948 + -0.6
320,948 + -0.6
320,948 + +0.4
321,038 + MPMX26_00290 0.12 +0.2
321,038 + MPMX26_00290 0.12 -0.0
321,038 + MPMX26_00290 0.12 -1.2
321,055 + MPMX26_00290 0.15 -0.9
321,055 + MPMX26_00290 0.15 -0.4
321,055 + MPMX26_00290 0.15 +0.4
321,055 + MPMX26_00290 0.15 -0.3
321,055 + MPMX26_00290 0.15 -0.0
321,060 + MPMX26_00290 0.16 -0.1
321,070 + MPMX26_00290 0.18 +0.6
321,083 + MPMX26_00290 0.21 +0.3
321,100 + MPMX26_00290 0.24 +0.2
321,100 + MPMX26_00290 0.24 -0.7
321,119 + MPMX26_00290 0.27 +0.0
321,119 + MPMX26_00290 0.27 -1.1
321,119 + MPMX26_00290 0.27 +1.6
321,165 + MPMX26_00290 0.35 -0.9
321,180 + MPMX26_00290 0.38 -1.8
321,190 + MPMX26_00290 0.40 +0.3
321,190 + MPMX26_00290 0.40 +0.6
321,190 + MPMX26_00290 0.40 -1.0
321,190 + MPMX26_00290 0.40 -0.4
321,190 + MPMX26_00290 0.40 +0.4
321,190 + MPMX26_00290 0.40 +0.2
321,190 + MPMX26_00290 0.40 +0.4
321,190 + MPMX26_00290 0.40 -0.5
321,190 + MPMX26_00290 0.40 +0.7
321,190 + MPMX26_00290 0.40 +0.2
321,190 + MPMX26_00290 0.40 -0.9
321,190 + MPMX26_00290 0.40 +0.8
321,190 + MPMX26_00290 0.40 +0.8
321,190 + MPMX26_00290 0.40 +0.3
321,190 + MPMX26_00290 0.40 -0.9
321,190 + MPMX26_00290 0.40 -0.4
321,190 + MPMX26_00290 0.40 -0.6
321,190 + MPMX26_00290 0.40 -0.6
321,190 + MPMX26_00290 0.40 -1.3
321,195 + MPMX26_00290 0.41 +0.1
321,195 + MPMX26_00290 0.41 +1.1
321,195 + MPMX26_00290 0.41 +0.2
321,195 + MPMX26_00290 0.41 +0.4
321,200 + MPMX26_00290 0.42 +0.4
321,209 + MPMX26_00290 0.43 -0.1
321,209 + MPMX26_00290 0.43 -0.2
321,244 + MPMX26_00290 0.50 +0.3
321,249 + MPMX26_00290 0.50 -1.3
321,249 + MPMX26_00290 0.50 +0.5
321,250 + MPMX26_00290 0.51 +0.3
321,252 + MPMX26_00290 0.51 +0.6
321,254 + MPMX26_00290 0.51 -0.0
321,254 + MPMX26_00290 0.51 +0.4
321,254 + MPMX26_00290 0.51 -0.5
321,254 + MPMX26_00290 0.51 -0.1
321,254 + MPMX26_00290 0.51 +0.3
321,254 + MPMX26_00290 0.51 -1.0
321,264 + MPMX26_00290 0.53 +0.3
321,306 + MPMX26_00290 0.61 -1.1
321,306 + MPMX26_00290 0.61 -2.3
321,311 + MPMX26_00290 0.62 -0.8
321,316 + MPMX26_00290 0.63 +1.3
321,316 + MPMX26_00290 0.63 -0.0
321,321 + MPMX26_00290 0.63 +0.8
321,342 + MPMX26_00290 0.67 +0.9
321,353 + MPMX26_00290 0.69 -0.4
321,371 + MPMX26_00290 0.72 -0.3

Or see this region's nucleotide sequence