Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00040

Experiment: L-tyrosine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00039 and MPMX26_00040 are separated by 69 nucleotidesMPMX26_00040 and MPMX26_00041 are separated by 284 nucleotides MPMX26_00039: MPMX26_00039 - NADPH-dependent stearoyl-CoA 9-desaturase, at 40,822 to 41,994 _00039 MPMX26_00040: MPMX26_00040 - Ribonuclease PH, at 42,064 to 42,780 _00040 MPMX26_00041: MPMX26_00041 - Non-hemolytic phospholipase C, at 43,065 to 45,227 _00041 Position (kb) 42 43Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 41.067 kb on - strand, within MPMX26_00039at 41.100 kb on + strand, within MPMX26_00039at 41.134 kb on - strand, within MPMX26_00039at 41.221 kb on + strand, within MPMX26_00039at 41.223 kb on + strand, within MPMX26_00039at 41.239 kb on + strand, within MPMX26_00039at 41.361 kb on + strand, within MPMX26_00039at 41.361 kb on + strand, within MPMX26_00039at 41.361 kb on + strand, within MPMX26_00039at 41.488 kb on + strand, within MPMX26_00039at 41.504 kb on + strand, within MPMX26_00039at 41.564 kb on + strand, within MPMX26_00039at 41.566 kb on + strand, within MPMX26_00039at 41.568 kb on + strand, within MPMX26_00039at 41.574 kb on - strand, within MPMX26_00039at 41.574 kb on - strand, within MPMX26_00039at 41.574 kb on - strand, within MPMX26_00039at 41.574 kb on - strand, within MPMX26_00039at 41.702 kb on + strand, within MPMX26_00039at 41.707 kb on + strand, within MPMX26_00039at 41.707 kb on + strand, within MPMX26_00039at 41.778 kb on + strand, within MPMX26_00039at 41.816 kb on + strand, within MPMX26_00039at 41.816 kb on + strand, within MPMX26_00039at 41.922 kb on + strandat 41.922 kb on + strandat 41.922 kb on + strandat 41.922 kb on + strandat 41.922 kb on + strandat 41.947 kb on + strandat 41.947 kb on + strandat 42.018 kb on + strandat 42.018 kb on + strandat 42.018 kb on + strandat 42.049 kb on + strandat 42.068 kb on + strandat 42.083 kb on + strandat 42.083 kb on + strandat 42.117 kb on + strandat 42.127 kb on + strandat 42.133 kb on + strandat 42.138 kb on + strand, within MPMX26_00040at 42.140 kb on + strand, within MPMX26_00040at 42.150 kb on + strand, within MPMX26_00040at 42.156 kb on + strand, within MPMX26_00040at 42.165 kb on + strand, within MPMX26_00040at 42.169 kb on + strand, within MPMX26_00040at 42.172 kb on + strand, within MPMX26_00040at 42.174 kb on + strand, within MPMX26_00040at 42.177 kb on + strand, within MPMX26_00040at 42.220 kb on + strand, within MPMX26_00040at 42.220 kb on + strand, within MPMX26_00040at 42.220 kb on + strand, within MPMX26_00040at 42.221 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.231 kb on + strand, within MPMX26_00040at 42.231 kb on + strand, within MPMX26_00040at 42.231 kb on + strand, within MPMX26_00040at 42.236 kb on + strand, within MPMX26_00040at 42.242 kb on + strand, within MPMX26_00040at 42.242 kb on + strand, within MPMX26_00040at 42.244 kb on + strand, within MPMX26_00040at 42.244 kb on + strand, within MPMX26_00040at 42.256 kb on + strand, within MPMX26_00040at 42.266 kb on + strand, within MPMX26_00040at 42.269 kb on + strand, within MPMX26_00040at 42.271 kb on + strand, within MPMX26_00040at 42.288 kb on + strand, within MPMX26_00040at 42.312 kb on + strand, within MPMX26_00040at 42.346 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.407 kb on + strand, within MPMX26_00040at 42.407 kb on + strand, within MPMX26_00040at 42.415 kb on + strand, within MPMX26_00040at 42.417 kb on + strand, within MPMX26_00040at 42.417 kb on + strand, within MPMX26_00040at 42.438 kb on + strand, within MPMX26_00040at 42.443 kb on + strand, within MPMX26_00040at 42.464 kb on + strand, within MPMX26_00040at 42.464 kb on + strand, within MPMX26_00040at 42.474 kb on + strand, within MPMX26_00040at 42.474 kb on + strand, within MPMX26_00040at 42.573 kb on + strand, within MPMX26_00040at 42.574 kb on + strand, within MPMX26_00040at 42.578 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.621 kb on + strand, within MPMX26_00040at 42.626 kb on + strand, within MPMX26_00040at 42.630 kb on + strand, within MPMX26_00040at 42.636 kb on + strand, within MPMX26_00040at 42.661 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.673 kb on + strand, within MPMX26_00040at 42.678 kb on + strand, within MPMX26_00040at 42.684 kb on + strand, within MPMX26_00040at 42.696 kb on + strand, within MPMX26_00040at 42.696 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.714 kb on + strandat 42.747 kb on + strandat 42.757 kb on + strandat 42.766 kb on + strandat 42.766 kb on + strandat 42.766 kb on + strandat 42.766 kb on + strandat 42.766 kb on + strandat 42.771 kb on + strandat 42.805 kb on + strandat 42.900 kb on + strandat 42.992 kb on + strandat 43.008 kb on - strandat 43.114 kb on + strandat 43.122 kb on - strandat 43.196 kb on - strandat 43.307 kb on + strand, within MPMX26_00041at 43.317 kb on + strand, within MPMX26_00041at 43.328 kb on + strand, within MPMX26_00041at 43.362 kb on + strand, within MPMX26_00041at 43.370 kb on - strand, within MPMX26_00041at 43.372 kb on + strand, within MPMX26_00041at 43.456 kb on - strand, within MPMX26_00041at 43.463 kb on + strand, within MPMX26_00041at 43.476 kb on - strand, within MPMX26_00041at 43.540 kb on - strand, within MPMX26_00041at 43.557 kb on + strand, within MPMX26_00041at 43.567 kb on + strand, within MPMX26_00041at 43.570 kb on - strand, within MPMX26_00041at 43.638 kb on + strand, within MPMX26_00041at 43.646 kb on - strand, within MPMX26_00041at 43.646 kb on - strand, within MPMX26_00041at 43.646 kb on - strand, within MPMX26_00041

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
remove
41,067 - MPMX26_00039 0.21 -0.9
41,100 + MPMX26_00039 0.24 -0.7
41,134 - MPMX26_00039 0.27 +2.0
41,221 + MPMX26_00039 0.34 +1.3
41,223 + MPMX26_00039 0.34 -0.3
41,239 + MPMX26_00039 0.36 -0.2
41,361 + MPMX26_00039 0.46 +0.1
41,361 + MPMX26_00039 0.46 +1.6
41,361 + MPMX26_00039 0.46 +1.6
41,488 + MPMX26_00039 0.57 +1.4
41,504 + MPMX26_00039 0.58 -0.4
41,564 + MPMX26_00039 0.63 +0.5
41,566 + MPMX26_00039 0.63 +0.1
41,568 + MPMX26_00039 0.64 -0.4
41,574 - MPMX26_00039 0.64 +0.9
41,574 - MPMX26_00039 0.64 +1.0
41,574 - MPMX26_00039 0.64 +1.0
41,574 - MPMX26_00039 0.64 +0.8
41,702 + MPMX26_00039 0.75 +0.1
41,707 + MPMX26_00039 0.75 +0.4
41,707 + MPMX26_00039 0.75 -1.0
41,778 + MPMX26_00039 0.82 -0.3
41,816 + MPMX26_00039 0.85 -0.4
41,816 + MPMX26_00039 0.85 -0.4
41,922 + +0.0
41,922 + +1.0
41,922 + +0.8
41,922 + +1.8
41,922 + -1.4
41,947 + +0.7
41,947 + +0.6
42,018 + -0.6
42,018 + -1.5
42,018 + +0.2
42,049 + -0.1
42,068 + -1.4
42,083 + -0.7
42,083 + -1.3
42,117 + -1.2
42,127 + -2.1
42,133 + -2.6
42,138 + MPMX26_00040 0.10 -1.9
42,140 + MPMX26_00040 0.11 -1.5
42,150 + MPMX26_00040 0.12 -1.2
42,156 + MPMX26_00040 0.13 -0.6
42,165 + MPMX26_00040 0.14 -2.3
42,169 + MPMX26_00040 0.15 -1.2
42,172 + MPMX26_00040 0.15 -0.9
42,174 + MPMX26_00040 0.15 -0.4
42,177 + MPMX26_00040 0.16 -1.4
42,220 + MPMX26_00040 0.22 -0.4
42,220 + MPMX26_00040 0.22 -2.5
42,220 + MPMX26_00040 0.22 -1.4
42,221 + MPMX26_00040 0.22 -0.9
42,226 + MPMX26_00040 0.23 -1.3
42,226 + MPMX26_00040 0.23 -2.0
42,226 + MPMX26_00040 0.23 -1.2
42,226 + MPMX26_00040 0.23 -1.3
42,226 + MPMX26_00040 0.23 -1.9
42,231 + MPMX26_00040 0.23 -1.4
42,231 + MPMX26_00040 0.23 -0.7
42,231 + MPMX26_00040 0.23 -1.9
42,236 + MPMX26_00040 0.24 -1.7
42,242 + MPMX26_00040 0.25 -2.1
42,242 + MPMX26_00040 0.25 -0.8
42,244 + MPMX26_00040 0.25 -0.9
42,244 + MPMX26_00040 0.25 -3.2
42,256 + MPMX26_00040 0.27 -1.4
42,266 + MPMX26_00040 0.28 +0.7
42,269 + MPMX26_00040 0.29 -1.3
42,271 + MPMX26_00040 0.29 -1.7
42,288 + MPMX26_00040 0.31 -1.0
42,312 + MPMX26_00040 0.35 -1.3
42,346 + MPMX26_00040 0.39 -1.4
42,347 + MPMX26_00040 0.39 -0.1
42,347 + MPMX26_00040 0.39 -1.2
42,347 + MPMX26_00040 0.39 +0.1
42,347 + MPMX26_00040 0.39 -3.1
42,347 + MPMX26_00040 0.39 -2.1
42,347 + MPMX26_00040 0.39 -1.6
42,347 + MPMX26_00040 0.39 +0.3
42,347 + MPMX26_00040 0.39 -1.6
42,347 + MPMX26_00040 0.39 -0.4
42,347 + MPMX26_00040 0.39 -1.6
42,347 + MPMX26_00040 0.39 -2.1
42,347 + MPMX26_00040 0.39 -1.5
42,347 + MPMX26_00040 0.39 +0.1
42,407 + MPMX26_00040 0.48 -0.9
42,407 + MPMX26_00040 0.48 -1.9
42,415 + MPMX26_00040 0.49 -2.4
42,417 + MPMX26_00040 0.49 -0.4
42,417 + MPMX26_00040 0.49 -1.5
42,438 + MPMX26_00040 0.52 -1.7
42,443 + MPMX26_00040 0.53 -0.7
42,464 + MPMX26_00040 0.56 -0.2
42,464 + MPMX26_00040 0.56 -0.7
42,474 + MPMX26_00040 0.57 -1.8
42,474 + MPMX26_00040 0.57 -2.4
42,573 + MPMX26_00040 0.71 -2.6
42,574 + MPMX26_00040 0.71 -0.7
42,578 + MPMX26_00040 0.72 -0.7
42,609 + MPMX26_00040 0.76 -2.3
42,609 + MPMX26_00040 0.76 -0.8
42,609 + MPMX26_00040 0.76 +0.3
42,609 + MPMX26_00040 0.76 -2.9
42,609 + MPMX26_00040 0.76 -1.3
42,621 + MPMX26_00040 0.78 -1.6
42,626 + MPMX26_00040 0.78 -0.8
42,630 + MPMX26_00040 0.79 -1.9
42,636 + MPMX26_00040 0.80 -2.2
42,661 + MPMX26_00040 0.83 -0.3
42,671 + MPMX26_00040 0.85 -0.2
42,671 + MPMX26_00040 0.85 -2.8
42,671 + MPMX26_00040 0.85 -2.2
42,671 + MPMX26_00040 0.85 -2.1
42,671 + MPMX26_00040 0.85 -0.6
42,671 + MPMX26_00040 0.85 -1.4
42,673 + MPMX26_00040 0.85 -2.8
42,678 + MPMX26_00040 0.86 -1.0
42,684 + MPMX26_00040 0.86 -1.3
42,696 + MPMX26_00040 0.88 +1.3
42,696 + MPMX26_00040 0.88 -0.3
42,702 + MPMX26_00040 0.89 -2.4
42,702 + MPMX26_00040 0.89 -2.2
42,702 + MPMX26_00040 0.89 -1.5
42,702 + MPMX26_00040 0.89 -1.1
42,702 + MPMX26_00040 0.89 +0.2
42,714 + -1.2
42,747 + +0.2
42,757 + -0.1
42,766 + +0.5
42,766 + +1.5
42,766 + +0.8
42,766 + +0.7
42,766 + +0.7
42,771 + -0.2
42,805 + -0.4
42,900 + -0.0
42,992 + +2.3
43,008 - -0.2
43,114 + +0.3
43,122 - +0.4
43,196 - +1.1
43,307 + MPMX26_00041 0.11 -1.5
43,317 + MPMX26_00041 0.12 -0.2
43,328 + MPMX26_00041 0.12 -0.0
43,362 + MPMX26_00041 0.14 -0.0
43,370 - MPMX26_00041 0.14 -0.4
43,372 + MPMX26_00041 0.14 -0.4
43,456 - MPMX26_00041 0.18 +2.1
43,463 + MPMX26_00041 0.18 -1.1
43,476 - MPMX26_00041 0.19 -0.2
43,540 - MPMX26_00041 0.22 +0.7
43,557 + MPMX26_00041 0.23 +0.3
43,567 + MPMX26_00041 0.23 +1.5
43,570 - MPMX26_00041 0.23 -1.4
43,638 + MPMX26_00041 0.26 +0.7
43,646 - MPMX26_00041 0.27 -0.7
43,646 - MPMX26_00041 0.27 +1.9
43,646 - MPMX26_00041 0.27 -1.0

Or see this region's nucleotide sequence