Strain Fitness in Escherichia coli ECRC101 around MCAODC_07260

Experiment: Bas14

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas14
1,467,862	+	livJ	MCAODC_07250	0.52	+0.1
1,467,862	+	livJ	MCAODC_07250	0.52	+0.1
1,467,863	-	livJ	MCAODC_07250	0.52	-0.4
1,467,957	-	livJ	MCAODC_07250	0.60	+0.3
1,468,063	+	livJ	MCAODC_07250	0.70	+0.4
1,468,202	+	livJ	MCAODC_07250	0.82	-1.6
1,468,203	-	livJ	MCAODC_07250	0.82	-0.9
1,468,203	-	livJ	MCAODC_07250	0.82	-1.1
1,468,269	-	livJ	MCAODC_07250	0.88	-0.9
1,468,296	+				+0.4
1,468,394	+				-1.2
1,468,394	+				+1.5
1,468,401	+				-0.5
1,468,401	+				+1.1
1,468,401	+				+1.9
1,468,402	-				-1.0
1,468,402	-				-0.1
1,468,405	+				-1.8
1,468,406	-				-0.1
1,468,406	-				+1.9
1,468,469	-				+0.6
1,468,469	-				-2.1
1,468,477	+				-0.4
1,468,491	+				+0.4
1,468,522	-				-0.1
1,468,526	+				-1.1
1,468,603	-		MCAODC_07255	0.21	-0.9
1,468,603	-		MCAODC_07255	0.21	+1.2
1,468,626	-		MCAODC_07255	0.30	-0.4
1,468,630	-		MCAODC_07255	0.31	-0.2
1,468,630	-		MCAODC_07255	0.31	-0.5
1,468,630	-		MCAODC_07255	0.31	-0.1
1,468,630	-		MCAODC_07255	0.31	+0.4
1,468,630	-		MCAODC_07255	0.31	-0.9
1,468,651	-		MCAODC_07255	0.39	-0.9
1,468,753	-		MCAODC_07255	0.78	-0.6
1,468,779	-		MCAODC_07255	0.87	-0.5
1,468,810	+				-1.2
1,468,811	-				+1.9
1,468,811	-				-2.4
1,468,811	-				+0.5
1,468,813	+				+0.2
1,468,814	-				-1.3
1,468,862	-				-0.3
1,468,868	+				-0.5
1,468,868	+				+0.9
1,468,869	-				-0.6
1,468,898	+	rimI	MCAODC_07260	0.15	-0.8
1,468,898	+	rimI	MCAODC_07260	0.15	+0.0
1,468,957	+	rimI	MCAODC_07260	0.26	+0.5
1,468,957	+	rimI	MCAODC_07260	0.26	-0.6
1,468,957	+	rimI	MCAODC_07260	0.26	-0.2
1,468,957	+	rimI	MCAODC_07260	0.26	-1.1
1,468,957	+	rimI	MCAODC_07260	0.26	+0.5
1,468,957	+	rimI	MCAODC_07260	0.26	+0.9
1,468,957	+	rimI	MCAODC_07260	0.26	-0.4
1,468,957	+	rimI	MCAODC_07260	0.26	-2.8
1,468,957	+	rimI	MCAODC_07260	0.26	-0.1
1,468,957	+	rimI	MCAODC_07260	0.26	-1.9
1,468,957	+	rimI	MCAODC_07260	0.26	-0.3
1,468,958	-	rimI	MCAODC_07260	0.26	-0.1
1,468,958	-	rimI	MCAODC_07260	0.26	+1.4
1,468,958	-	rimI	MCAODC_07260	0.26	+0.9
1,468,958	-	rimI	MCAODC_07260	0.26	+0.1
1,468,958	-	rimI	MCAODC_07260	0.26	-1.0
1,468,958	-	rimI	MCAODC_07260	0.26	-0.6
1,468,958	-	rimI	MCAODC_07260	0.26	+0.5
1,468,958	-	rimI	MCAODC_07260	0.26	-1.1
1,468,958	-	rimI	MCAODC_07260	0.26	-0.6
1,468,959	+	rimI	MCAODC_07260	0.27	+0.1
1,469,000	-	rimI	MCAODC_07260	0.34	-0.1
1,469,000	-	rimI	MCAODC_07260	0.34	-0.9
1,469,000	-	rimI	MCAODC_07260	0.34	-0.9
1,469,002	+	rimI	MCAODC_07260	0.35	+1.5
1,469,002	+	rimI	MCAODC_07260	0.35	-0.6
1,469,002	+	rimI	MCAODC_07260	0.35	+0.6
1,469,003	-	rimI	MCAODC_07260	0.35	-0.9
1,469,003	-	rimI	MCAODC_07260	0.35	-1.4
1,469,003	-	rimI	MCAODC_07260	0.35	-0.4
1,469,003	-	rimI	MCAODC_07260	0.35	-0.6
1,469,009	+	rimI	MCAODC_07260	0.36	-2.3
1,469,080	-	rimI	MCAODC_07260	0.49	-0.5
1,469,199	+	rimI	MCAODC_07260	0.72	+0.8
1,469,199	+	rimI	MCAODC_07260	0.72	-2.2
1,469,200	-	rimI	MCAODC_07260	0.72	-0.1
1,469,200	-	rimI	MCAODC_07260	0.72	-1.0
1,469,200	-	rimI	MCAODC_07260	0.72	+0.2
1,469,241	+	rimI	MCAODC_07260	0.80	+0.2
1,469,242	-	rimI	MCAODC_07260	0.80	+1.9
1,469,249	-	rimI	MCAODC_07260	0.81	+0.3
1,469,274	-	rimI	MCAODC_07260	0.86	-0.4
1,469,331	+				-0.1
1,469,375	+				+0.1
1,469,376	-				+0.2
1,469,393	+	panM	MCAODC_07265	0.13	-1.0
1,469,465	+	panM	MCAODC_07265	0.32	-0.3
1,469,488	+	panM	MCAODC_07265	0.38	+0.8
1,469,489	-	panM	MCAODC_07265	0.38	-0.6
1,469,489	-	panM	MCAODC_07265	0.38	+0.2
1,469,559	+	panM	MCAODC_07265	0.56	-0.6
1,469,559	+	panM	MCAODC_07265	0.56	+0.7
1,469,608	+	panM	MCAODC_07265	0.69	+1.3
1,469,608	+	panM	MCAODC_07265	0.69	+1.4
1,469,609	-	panM	MCAODC_07265	0.69	-0.3
1,469,818	+				-1.4
1,469,826	+				-2.3
1,469,847	+				-0.6
1,469,879	-				+0.1
1,470,076	+				+0.0
1,470,101	-				-0.9
1,470,107	+				+0.7
1,470,108	-				+1.8
1,470,108	-				+0.4
1,470,108	-				+1.4
1,470,108	-				-0.5
1,470,170	+				+0.5
1,470,171	-				-0.8
1,470,227	+				+0.5
1,470,228	-				-0.3
1,470,228	-				+0.8
1,470,317	+	livK	MCAODC_07270	0.15	+0.7
1,470,318	-	livK	MCAODC_07270	0.15	+0.1
1,470,318	-	livK	MCAODC_07270	0.15	+1.3
1,470,318	-	livK	MCAODC_07270	0.15	+3.9