Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5841

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
38,829	-		GFF5840	0.26	+0.6
39,370	-		GFF5840	0.70	+0.0
39,575	-		GFF5840	0.87	-0.4
39,583	+		GFF5840	0.88	+0.2
39,583	+		GFF5840	0.88	-0.4
39,825	+				-0.4
39,876	+		GFF5841	0.21	-0.3
39,877	-		GFF5841	0.21	-0.2
39,888	+		GFF5841	0.23	+0.1
40,076	+		GFF5841	0.68	-0.3
40,077	-		GFF5841	0.68	-0.1
40,234	+				-2.3
40,265	-				-0.3
40,462	+				+0.2
41,091	+		GFF5842	0.38	-1.1
41,130	+		GFF5842	0.39	+0.2