Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5701

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
2,723,497	-		GFF5700	0.31	-0.2
2,723,569	-		GFF5700	0.39	+0.7
2,723,659	-		GFF5700	0.49	+0.6
2,723,659	-		GFF5700	0.49	+0.4
2,723,659	-		GFF5700	0.49	-0.4
2,723,659	-		GFF5700	0.49	+0.2
2,723,835	+		GFF5700	0.69	-0.0
2,723,835	+		GFF5700	0.69	+0.0
2,723,956	-		GFF5700	0.82	+0.0
2,724,096	+				-0.7
2,724,277	-		GFF5701	0.24	+0.7
2,724,651	+		GFF5701	0.81	+0.3
2,724,690	+		GFF5701	0.88	-0.5
2,724,690	+		GFF5701	0.88	+0.3
2,724,690	+		GFF5701	0.88	+0.1
2,724,691	-		GFF5701	0.88	+0.5
2,724,691	-		GFF5701	0.88	-0.4
2,724,691	-		GFF5701	0.88	+0.0
2,725,059	-		GFF5702	0.44	-0.0
2,725,070	+		GFF5702	0.46	+0.5
2,725,352	+		GFF5702	0.89	-0.4
2,725,353	-		GFF5702	0.89	-0.1