Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5369

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
2,370,220	+		GFF5368	0.43	-0.3
2,370,799	+				+0.7
2,370,877	+				-0.3
2,370,877	+				-0.8
2,370,877	+				-0.5
2,370,878	-				+0.4
2,371,063	+		GFF5369	0.30	-0.7
2,371,064	-		GFF5369	0.30	-0.1
2,371,064	-		GFF5369	0.30	+0.1
2,371,342	+		GFF5369	0.69	+1.1
2,371,342	+		GFF5369	0.69	+0.2
2,371,342	+		GFF5369	0.69	-0.8
2,371,343	-		GFF5369	0.69	-0.3
2,371,766	-		GFF5370	0.39	-0.5
2,371,894	+		GFF5370	0.66	+0.7
2,372,265	+				-0.5
2,372,265	+				-1.3