Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4637

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
1,586,315	-		GFF4635	0.33	+0.4
1,586,315	-		GFF4635	0.33	-0.0
1,586,453	-		GFF4635	0.50	+0.0
1,586,866	-				-0.1
1,586,867	+				-0.3
1,586,867	+				-1.1
1,586,867	+				-0.2
1,586,867	+				+0.3
1,586,867	+				+0.5
1,586,867	+				-1.0
1,586,867	+				-0.4
1,586,867	+				-0.1
1,586,868	-				-1.3
1,586,868	-				+0.5
1,586,868	-				-1.6
1,586,868	-				+0.3
1,586,868	-				-1.5
1,586,868	-				+1.3
1,586,873	+				-0.5
1,586,873	+				-0.3
1,586,873	+				+0.1
1,586,874	-				-0.5
1,586,874	-				+0.3
1,586,874	-				-0.1
1,586,911	+				+0.7
1,586,911	+				+0.4
1,586,912	-				+0.5
1,587,010	+				-0.5
1,587,092	-		GFF4636	0.43	+1.1
1,587,143	+		GFF4636	0.70	-0.1
1,587,286	-		GFF4637	0.20	-0.7
1,587,316	+		GFF4637	0.26	-0.8
1,587,396	+		GFF4637	0.44	-1.6
1,587,396	+		GFF4637	0.44	-0.4
1,587,397	-		GFF4637	0.44	+0.0
1,587,456	+		GFF4637	0.57	+0.4
1,587,456	+		GFF4637	0.57	-0.5
1,587,457	-		GFF4637	0.57	+0.1
1,587,457	-		GFF4637	0.57	+0.5
1,588,504	+		GFF4639	0.14	+0.5
1,588,505	-		GFF4639	0.14	+0.1
1,588,505	-		GFF4639	0.14	-0.4