Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4602

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
1,545,621	+		GFF4600	0.50	-0.3
1,545,621	+		GFF4600	0.50	-0.5
1,545,621	+		GFF4600	0.50	-0.5
1,545,621	+		GFF4600	0.50	+0.0
1,545,621	+		GFF4600	0.50	-1.1
1,545,622	-		GFF4600	0.50	-0.1
1,545,622	-		GFF4600	0.50	-0.7
1,545,745	-		GFF4600	0.65	-0.4
1,545,807	+		GFF4600	0.72	-0.9
1,545,807	+		GFF4600	0.72	+0.1
1,545,808	-		GFF4600	0.72	-0.1
1,545,960	+				+0.6
1,546,200	-		GFF4601	0.35	+0.3
1,546,649	+		GFF4602	0.14	+0.1
1,546,650	-		GFF4602	0.14	-1.3
1,546,650	-		GFF4602	0.14	+0.7
1,546,682	+		GFF4602	0.17	+0.1
1,546,682	+		GFF4602	0.17	-0.2
1,546,683	-		GFF4602	0.18	-0.5
1,546,805	+		GFF4602	0.29	+0.2
1,546,805	+		GFF4602	0.29	-0.2
1,546,805	+		GFF4602	0.29	+0.8
1,546,805	+		GFF4602	0.29	+0.6
1,546,806	-		GFF4602	0.30	+0.3
1,546,917	-		GFF4602	0.41	-0.0
1,547,066	+		GFF4602	0.55	+0.7
1,547,106	-		GFF4602	0.59	+0.3
1,547,106	-		GFF4602	0.59	+0.2
1,547,791	+		GFF4603	0.16	+0.4
1,547,792	-		GFF4603	0.16	-0.1
1,547,951	-		GFF4603	0.25	-0.2
1,547,951	-		GFF4603	0.25	+0.4
1,548,167	-		GFF4603	0.38	-0.2
1,548,167	-		GFF4603	0.38	+1.0