Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4338

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
1,266,506	-		GFF4337	0.16	+0.4
1,266,520	+		GFF4337	0.18	+0.4
1,266,586	+		GFF4337	0.24	+0.2
1,266,587	-		GFF4337	0.24	-2.0
1,266,640	+		GFF4337	0.29	-0.2
1,266,655	+		GFF4337	0.30	+0.2
1,266,656	-		GFF4337	0.31	+0.9
1,266,656	-		GFF4337	0.31	-1.2
1,266,656	-		GFF4337	0.31	+0.0
1,266,676	+		GFF4337	0.32	+0.5
1,266,676	+		GFF4337	0.32	-0.4
1,266,676	+		GFF4337	0.32	+1.1
1,266,676	+		GFF4337	0.32	+1.3
1,266,676	+		GFF4337	0.32	-2.7
1,266,676	+		GFF4337	0.32	-1.0
1,266,677	-		GFF4337	0.33	+0.5
1,266,770	-		GFF4337	0.41	-0.1
1,266,925	+		GFF4337	0.56	+1.3
1,266,925	+		GFF4337	0.56	-0.8
1,267,018	+		GFF4337	0.65	-1.5
1,267,018	+		GFF4337	0.65	-0.1
1,267,018	+		GFF4337	0.65	-0.7
1,267,057	+		GFF4337	0.69	-0.3
1,267,057	+		GFF4337	0.69	+0.5
1,267,057	+		GFF4337	0.69	-0.0
1,267,058	-		GFF4337	0.69	-0.4
1,267,689	+		GFF4338	0.18	-2.3
1,268,118	+		GFF4338	0.45	-0.2
1,268,118	+		GFF4338	0.45	-0.1
1,268,119	-		GFF4338	0.45	+0.0
1,268,223	+		GFF4338	0.52	-0.0
1,268,224	-		GFF4338	0.52	-1.1
1,268,224	-		GFF4338	0.52	-1.3
1,268,832	+				-0.2
1,268,832	+				-0.8
1,268,832	+				+0.1
1,268,833	-				+0.5
1,268,833	-				+0.2
1,268,958	+				-0.3
1,268,959	-				+0.7
1,268,959	-				-0.1
1,269,040	+				+0.4
1,269,041	-				+0.5
1,269,041	-				+0.2
1,269,041	-				+0.4
1,269,041	-				+0.0
1,269,042	+				-1.6
1,269,042	+				+0.3
1,269,285	+		GFF4339	0.30	+0.9
1,269,286	-		GFF4339	0.31	+0.2
1,269,286	-		GFF4339	0.31	-0.8
1,269,286	-		GFF4339	0.31	+0.7
1,269,533	-		GFF4339	0.63	-0.1
1,269,897	+		GFF4340	0.36	+0.1
1,269,897	+		GFF4340	0.36	+0.6
1,269,897	+		GFF4340	0.36	+1.6
1,269,897	+		GFF4340	0.36	-0.2
1,269,897	+		GFF4340	0.36	+0.4
1,269,897	+		GFF4340	0.36	-0.2
1,269,897	+		GFF4340	0.36	+0.2
1,269,897	+		GFF4340	0.36	-0.2
1,269,897	+		GFF4340	0.36	-0.3
1,269,897	+		GFF4340	0.36	-0.9
1,269,898	-		GFF4340	0.37	-0.0
1,269,898	-		GFF4340	0.37	-0.1
1,269,898	-		GFF4340	0.37	+0.9
1,269,898	-		GFF4340	0.37	+0.4
1,269,898	-		GFF4340	0.37	+0.4
1,269,898	-		GFF4340	0.37	+0.3
1,269,898	-		GFF4340	0.37	+0.8
1,269,898	-		GFF4340	0.37	-0.2
1,269,898	-		GFF4340	0.37	-0.1