Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4081
Experiment: Ying_Nucleobase14 rep B; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_Nucleobase14 rep B; time point 1 |
|---|---|---|---|---|---|
| remove | |||||
| 993,282 | + | GFF4081 | 0.18 | +0.7 | |
| 993,301 | + | GFF4081 | 0.19 | -0.3 | |
| 994,178 | - | GFF4081 | 0.83 | +0.0 | |
| 994,339 | + | -0.8 | |||
| 994,339 | + | -0.4 | |||
| 994,339 | + | +0.1 | |||
| 994,340 | - | -0.9 | |||
| 994,354 | + | +0.4 | |||
| 994,446 | - | -0.9 | |||
| 994,896 | - | GFF4082 | 0.52 | -0.3 | |
| 994,896 | - | GFF4082 | 0.52 | +1.5 | |
| 995,261 | + | +0.4 | |||
| 995,295 | - | -1.8 |
Or see this region's nucleotide sequence