Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3846

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
755,942	+		GFF3845	0.47	+0.6
756,564	+				+0.2
756,565	-				+0.2
756,565	-				+0.2
756,565	-				+0.3
756,746	-		GFF3846	0.11	+0.2
756,898	+		GFF3846	0.26	+0.4
756,898	+		GFF3846	0.26	-0.3
756,899	-		GFF3846	0.26	+0.2
757,312	+		GFF3846	0.66	+0.1
757,339	+		GFF3846	0.68	+0.5
757,505	-		GFF3846	0.84	+0.6
757,708	+				+0.2
757,816	+				+1.1
758,119	+		GFF3847	0.20	-0.6
758,149	+		GFF3847	0.21	+0.1
758,273	-		GFF3847	0.27	+1.0