Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2527

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
108,139	+		GFF2526	0.21	-0.8
108,140	-		GFF2526	0.21	+0.4
108,161	+		GFF2526	0.23	+0.3
108,161	+		GFF2526	0.23	+0.1
108,161	+		GFF2526	0.23	+0.1
108,161	+		GFF2526	0.23	+0.7
108,161	+		GFF2526	0.23	+0.4
108,161	+		GFF2526	0.23	-0.0
108,161	+		GFF2526	0.23	+0.1
108,161	+		GFF2526	0.23	-1.8
108,161	+		GFF2526	0.23	+1.2
108,162	-		GFF2526	0.23	-0.4
108,162	-		GFF2526	0.23	+1.1
108,162	-		GFF2526	0.23	-0.9
108,162	-		GFF2526	0.23	-0.7
108,162	-		GFF2526	0.23	+0.8
108,162	-		GFF2526	0.23	-0.6
108,162	-		GFF2526	0.23	+0.3
108,162	-		GFF2526	0.23	-0.5
108,162	-		GFF2526	0.23	-0.6
108,278	+		GFF2526	0.32	-1.1
108,279	-		GFF2526	0.32	-0.4
108,290	+		GFF2526	0.33	-0.2
108,632	+		GFF2526	0.61	-0.1
108,633	-		GFF2526	0.61	-0.3
108,633	-		GFF2526	0.61	-0.2
108,656	-		GFF2526	0.63	+0.2
108,662	+		GFF2526	0.63	+1.2
108,684	-		GFF2526	0.65	+1.2
108,694	+		GFF2526	0.66	+0.0
108,749	+		GFF2526	0.71	+0.0
108,750	-		GFF2526	0.71	-0.1
108,777	-		GFF2526	0.73	-0.4
108,777	-		GFF2526	0.73	-0.6
108,863	+		GFF2526	0.80	-0.6
108,863	+		GFF2526	0.80	-0.3
108,863	+		GFF2526	0.80	+0.1
108,864	-		GFF2526	0.80	-0.4
108,864	-		GFF2526	0.80	+0.1
109,343	-		GFF2527	0.30	-1.2
109,469	-		GFF2527	0.46	-0.8
109,489	+		GFF2527	0.49	-0.4
109,489	+		GFF2527	0.49	-0.2
109,489	+		GFF2527	0.49	+0.8
109,490	-		GFF2527	0.49	-2.4
109,490	-		GFF2527	0.49	+0.0
109,490	-		GFF2527	0.49	-1.2
109,490	-		GFF2527	0.49	-0.4
109,490	-		GFF2527	0.49	+0.1
109,564	+		GFF2527	0.59	-0.2
109,610	-		GFF2527	0.64	-0.4
110,014	-				+0.2
110,115	+		GFF2528	0.17	+0.7
110,115	+		GFF2528	0.17	+0.2
110,115	+		GFF2528	0.17	+0.1
110,115	+		GFF2528	0.17	+0.1
110,116	-		GFF2528	0.17	-2.3
110,121	+		GFF2528	0.18	+1.8
110,121	+		GFF2528	0.18	-0.6
110,121	+		GFF2528	0.18	-0.1
110,121	+		GFF2528	0.18	-0.4
110,121	+		GFF2528	0.18	-0.3
110,121	+		GFF2528	0.18	-0.2
110,121	+		GFF2528	0.18	-0.1
110,122	-		GFF2528	0.18	+0.2
110,122	-		GFF2528	0.18	+0.9
110,122	-		GFF2528	0.18	+1.0
110,122	-		GFF2528	0.18	-0.0
110,122	-		GFF2528	0.18	-1.2
110,122	-		GFF2528	0.18	-1.0
110,220	+		GFF2528	0.25	-0.6
110,221	-		GFF2528	0.25	-0.6
110,221	-		GFF2528	0.25	-1.6
110,272	-		GFF2528	0.29	-0.3
110,272	-		GFF2528	0.29	-1.1
110,350	-		GFF2528	0.34	-0.5
110,589	+		GFF2528	0.52	+0.8
110,589	+		GFF2528	0.52	+1.3
110,589	+		GFF2528	0.52	+0.4
110,589	+		GFF2528	0.52	+0.1
110,590	-		GFF2528	0.52	-0.1
110,590	-		GFF2528	0.52	-0.0
110,590	-		GFF2528	0.52	-0.2
110,590	-		GFF2528	0.52	-0.1
110,590	-		GFF2528	0.52	+0.3
110,718	+		GFF2528	0.61	-0.0
110,719	-		GFF2528	0.62	+0.4
110,719	-		GFF2528	0.62	-1.3
110,719	-		GFF2528	0.62	+0.2
110,719	-		GFF2528	0.62	-0.2