Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF240

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
259,184	+				-1.3
259,560	-		GFF239	0.71	+0.5
259,667	+		GFF239	0.89	+0.1
259,688	+				+0.1
259,689	-				+1.3
259,727	+				-0.1
259,884	-		GFF240	0.69	+0.3
259,884	-		GFF240	0.69	+0.5
260,285	+				-1.4
260,285	+				-0.0
260,285	+				+0.1
260,286	-				-0.2
260,286	-				-0.1
260,493	+				+2.5
260,494	-				-0.9
260,494	-				+1.0