Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1044

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
782,065	+		GFF1042	0.81	+0.1
782,066	-		GFF1042	0.82	-0.5
782,066	-		GFF1042	0.82	-0.1
782,265	-		GFF1043	0.13	-1.3
782,624	+		GFF1043	0.65	-0.2
783,052	+		GFF1044	0.32	+0.3
783,052	+		GFF1044	0.32	+0.2
783,052	+		GFF1044	0.32	+0.2
783,097	-		GFF1044	0.39	-0.1
783,097	-		GFF1044	0.39	-0.3
783,214	+		GFF1044	0.58	+0.3
783,214	+		GFF1044	0.58	-0.2
783,340	+		GFF1044	0.78	+0.3
783,341	-		GFF1044	0.78	+0.3
783,341	-		GFF1044	0.78	+0.6
783,341	-		GFF1044	0.78	+0.5
783,548	+				+0.1
783,548	+				-0.0
783,549	-				-1.1
783,549	-				-0.1
783,549	-				-1.8
783,549	-				-0.8
783,668	+		GFF1045	0.30	+0.2
783,702	-		GFF1045	0.35	+0.5
783,702	-		GFF1045	0.35	-0.2
783,717	-		GFF1045	0.38	-1.0
783,815	+		GFF1045	0.54	+0.0
783,816	-		GFF1045	0.55	-0.2
783,816	-		GFF1045	0.55	-1.5
783,816	-		GFF1045	0.55	-0.6
783,821	+		GFF1045	0.55	+0.4
783,822	-		GFF1045	0.56	-0.3
783,822	-		GFF1045	0.56	-0.7
783,822	-		GFF1045	0.56	+0.3
783,926	+		GFF1045	0.73	-0.2
783,926	+		GFF1045	0.73	-0.1
783,926	+		GFF1045	0.73	+0.7
783,926	+		GFF1045	0.73	+0.2
783,927	-		GFF1045	0.73	-0.4
784,005	-		GFF1045	0.87	-1.0
784,005	-		GFF1045	0.87	-0.1
784,321	-		GFF1046	0.15	-0.2
784,321	-		GFF1046	0.15	+0.2
784,324	+		GFF1046	0.15	+0.2
784,413	+		GFF1046	0.21	+1.7
784,449	+		GFF1046	0.23	-0.9
784,449	+		GFF1046	0.23	+1.3
784,458	-		GFF1046	0.23	+1.1