Strain Fitness in Escherichia fergusonii Becca around EFB2_02965

Experiment: BHIS no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community
3,096,343	+		EFB2_02964	0.67	-0.3
3,096,343	+		EFB2_02964	0.67	+0.7
3,096,343	+		EFB2_02964	0.67	-1.9
3,096,343	+		EFB2_02964	0.67	+0.1
3,096,343	+		EFB2_02964	0.67	+0.9
3,096,344	-		EFB2_02964	0.67	-0.2
3,096,344	-		EFB2_02964	0.67	+0.5
3,096,344	-		EFB2_02964	0.67	-1.1
3,096,344	-		EFB2_02964	0.67	+2.3
3,096,344	-		EFB2_02964	0.67	+0.8
3,096,344	-		EFB2_02964	0.67	-0.3
3,096,344	-		EFB2_02964	0.67	-1.9
3,096,344	-		EFB2_02964	0.67	-2.2
3,096,344	-		EFB2_02964	0.67	+1.1
3,096,344	-		EFB2_02964	0.67	-1.6
3,096,344	-		EFB2_02964	0.67	+0.4
3,096,344	-		EFB2_02964	0.67	-0.3
3,096,344	-		EFB2_02964	0.67	-1.4
3,096,369	+		EFB2_02964	0.68	+0.5
3,096,370	-		EFB2_02964	0.68	-0.1
3,096,370	-		EFB2_02964	0.68	-1.0
3,096,370	-		EFB2_02964	0.68	-1.4
3,096,373	+		EFB2_02964	0.68	+0.7
3,096,373	+		EFB2_02964	0.68	+1.7
3,096,373	+		EFB2_02964	0.68	+0.6
3,096,373	+		EFB2_02964	0.68	+1.1
3,096,373	+		EFB2_02964	0.68	-1.7
3,096,373	+		EFB2_02964	0.68	+0.3
3,096,373	+		EFB2_02964	0.68	+0.1
3,096,373	+		EFB2_02964	0.68	-1.3
3,096,373	+		EFB2_02964	0.68	+1.2
3,096,373	+		EFB2_02964	0.68	+1.5
3,096,373	+		EFB2_02964	0.68	+0.9
3,096,373	+		EFB2_02964	0.68	+1.1
3,096,373	+		EFB2_02964	0.68	-0.7
3,096,373	+		EFB2_02964	0.68	-0.8
3,096,373	+		EFB2_02964	0.68	+1.2
3,096,373	+		EFB2_02964	0.68	+0.9
3,096,373	+		EFB2_02964	0.68	+0.5
3,096,373	+		EFB2_02964	0.68	+2.7
3,096,374	-		EFB2_02964	0.68	+0.0
3,096,374	-		EFB2_02964	0.68	+1.3
3,096,374	-		EFB2_02964	0.68	-0.3
3,096,374	-		EFB2_02964	0.68	-1.0
3,096,374	-		EFB2_02964	0.68	+2.5
3,096,374	-		EFB2_02964	0.68	+1.5
3,096,374	-		EFB2_02964	0.68	-0.6
3,096,374	-		EFB2_02964	0.68	+1.0
3,096,374	-		EFB2_02964	0.68	-2.4
3,096,374	-		EFB2_02964	0.68	-2.4
3,096,374	-		EFB2_02964	0.68	+0.9
3,096,374	-		EFB2_02964	0.68	+1.1
3,096,374	-		EFB2_02964	0.68	-0.8
3,096,374	-		EFB2_02964	0.68	-2.3
3,096,374	-		EFB2_02964	0.68	-3.0
3,096,374	-		EFB2_02964	0.68	-0.2
3,096,376	+		EFB2_02964	0.68	+0.2
3,096,376	+		EFB2_02964	0.68	+0.9
3,096,376	+		EFB2_02964	0.68	+0.9
3,096,376	+		EFB2_02964	0.68	-1.8
3,096,376	+		EFB2_02964	0.68	+1.2
3,096,377	-		EFB2_02964	0.68	-1.3
3,096,377	-		EFB2_02964	0.68	-0.6
3,096,377	-		EFB2_02964	0.68	-2.2
3,096,377	-		EFB2_02964	0.68	+0.9
3,096,377	-		EFB2_02964	0.68	-0.3
3,096,385	+		EFB2_02964	0.69	+0.8
3,096,386	-		EFB2_02964	0.69	+0.5
3,096,386	-		EFB2_02964	0.69	-1.0
3,096,386	-		EFB2_02964	0.69	-0.4
3,096,392	-		EFB2_02964	0.69	-1.1
3,096,392	-		EFB2_02964	0.69	+0.7
3,096,392	-		EFB2_02964	0.69	+0.6
3,096,392	-		EFB2_02964	0.69	+0.6
3,096,476	-		EFB2_02964	0.74	+0.6
3,096,491	+		EFB2_02964	0.74	+0.7
3,096,491	+		EFB2_02964	0.74	-1.9
3,096,492	-		EFB2_02964	0.74	+2.3
3,096,492	-		EFB2_02964	0.74	-1.0
3,096,492	-		EFB2_02964	0.74	+0.9
3,096,492	-		EFB2_02964	0.74	+2.1
3,096,492	-		EFB2_02964	0.74	-2.8
3,096,551	+		EFB2_02964	0.77	-1.0
3,096,551	+		EFB2_02964	0.77	-0.5
3,096,551	+		EFB2_02964	0.77	-0.3
3,096,551	+		EFB2_02964	0.77	-0.3
3,096,551	+		EFB2_02964	0.77	+0.6
3,096,551	+		EFB2_02964	0.77	-1.8
3,096,551	+		EFB2_02964	0.77	+0.9
3,096,552	-		EFB2_02964	0.77	+0.6
3,096,552	-		EFB2_02964	0.77	-0.0
3,096,552	-		EFB2_02964	0.77	+0.0
3,096,552	-		EFB2_02964	0.77	-1.3
3,096,552	-		EFB2_02964	0.77	-1.0
3,096,552	-		EFB2_02964	0.77	-0.5
3,096,577	-		EFB2_02964	0.79	-1.3
3,096,610	+		EFB2_02964	0.80	-1.8
3,096,610	+		EFB2_02964	0.80	-1.1
3,096,611	-		EFB2_02964	0.80	+0.7
3,096,611	-		EFB2_02964	0.80	+1.1
3,096,611	-		EFB2_02964	0.80	+0.3
3,096,611	-		EFB2_02964	0.80	+1.2
3,096,611	-		EFB2_02964	0.80	-2.1
3,096,636	+		EFB2_02964	0.82	+1.6
3,096,636	+		EFB2_02964	0.82	-0.3
3,096,636	+		EFB2_02964	0.82	+1.7
3,096,636	+		EFB2_02964	0.82	+1.1
3,096,636	+		EFB2_02964	0.82	+0.3
3,096,637	-		EFB2_02964	0.82	-0.8
3,096,637	-		EFB2_02964	0.82	-0.5
3,096,637	-		EFB2_02964	0.82	-1.3
3,096,637	-		EFB2_02964	0.82	-2.2
3,096,637	-		EFB2_02964	0.82	-2.3
3,096,637	-		EFB2_02964	0.82	-2.5
3,096,637	-		EFB2_02964	0.82	+0.4
3,096,711	+		EFB2_02964	0.85	+1.1
3,096,720	-		EFB2_02964	0.86	-2.0
3,096,724	+		EFB2_02964	0.86	+1.5
3,096,725	-		EFB2_02964	0.86	+0.5
3,096,725	-		EFB2_02964	0.86	-1.3
3,096,725	-		EFB2_02964	0.86	-0.8
3,096,725	-		EFB2_02964	0.86	-0.8
3,096,800	-		EFB2_02964	0.90	+0.3
3,096,800	-		EFB2_02964	0.90	+0.5
3,096,800	-		EFB2_02964	0.90	+1.0
3,096,800	-		EFB2_02964	0.90	+0.7
3,096,864	-				-2.8
3,096,864	-				-3.4
3,096,901	+				+0.0
3,096,901	+				-2.5
3,096,901	+				-2.4
3,096,901	+				-1.9
3,096,901	+				+0.5
3,096,901	+				-1.3
3,096,901	+				-1.6
3,096,901	+				-1.5
3,096,901	+				-1.7
3,096,902	-				+0.1
3,096,902	-				-0.4
3,096,907	+				+0.4
3,096,913	+				+0.8
3,096,913	+				-1.5
3,096,913	+				+3.4
3,096,913	+				+0.4
3,096,913	+				-1.4
3,096,913	+				-1.1
3,096,913	+				-0.7
3,096,913	+				-1.1
3,096,914	-				+0.4
3,096,914	-				+0.2
3,096,914	-				+0.8
3,096,914	-				+1.5
3,096,914	-				+1.0
3,096,914	-				-3.5
3,096,914	-				+0.5
3,096,914	-				+0.4
3,096,914	-				+0.4
3,096,914	-				+0.2
3,096,938	+				-1.8
3,096,938	+				+2.1
3,096,938	+				-0.4
3,096,938	+				+0.9
3,096,938	+				-0.3
3,096,938	+				-0.3
3,096,938	+				-1.5
3,096,938	+				-0.8
3,096,939	-				+1.5
3,096,939	-				+0.0
3,096,939	-				+1.7
3,096,939	-				+2.1
3,096,939	-				-0.1
3,096,939	-				+1.0
3,096,939	-				+0.7
3,096,955	+				-2.1
3,096,955	+				-1.3
3,096,956	-				+0.0
3,096,959	+				+1.1
3,096,959	+				-2.2
3,096,959	+				-1.1
3,096,959	+				-0.5
3,096,959	+				+0.2
3,096,959	+				+0.1
3,096,960	-				-1.7
3,096,960	-				-0.3
3,096,960	-				+0.7
3,096,960	-				+0.2
3,096,960	-				-1.1
3,096,960	-				-1.6
3,096,960	-				+0.8
3,096,964	+				+0.1
3,096,965	-				+0.2
3,096,965	-				-2.3
3,096,965	-				-1.0
3,096,965	-				-1.0
3,096,965	-				+1.1
3,096,965	-				+1.9
3,096,965	-				+0.6
3,096,983	+				-0.3
3,096,983	+				+1.0
3,096,983	+				-1.4
3,096,983	+				+0.7
3,096,984	-				-1.2
3,096,984	-				+0.5
3,096,984	-				-1.9
3,096,984	-				-0.3
3,096,984	-				-1.4
3,096,984	-				+0.6
3,096,991	+				-1.8
3,096,991	+				+0.6
3,096,991	+				+0.4
3,096,991	+				+0.1
3,096,991	+				-0.4
3,096,991	+				+0.5
3,096,991	+				-2.7
3,096,991	+				+1.8
3,096,991	+				+0.7
3,096,991	+				-1.8
3,096,991	+				-1.1
3,096,991	+				-0.4
3,096,992	-				-1.8
3,096,992	-				-1.2
3,096,992	-				-0.2
3,096,992	-				-1.8
3,096,992	-				-2.3
3,096,992	-				+1.2
3,096,992	-				-2.0
3,096,992	-				-1.5
3,096,992	-				+1.6
3,096,992	-				-0.4
3,096,992	-				-1.8
3,096,992	-				+0.7
3,096,992	-				+0.7
3,096,992	-				-0.2
3,096,992	-				+1.0
3,096,992	-				+0.3
3,096,992	-				-2.0
3,096,992	-				+0.3
3,096,992	-				-1.3
3,096,993	+				+0.3
3,096,993	+				+0.2
3,096,993	+				+0.9
3,096,993	+				+0.1
3,096,993	+				+0.8
3,096,993	+				+0.2
3,096,993	+				+0.9
3,096,993	+				+0.6
3,096,993	+				-0.0
3,096,993	+				+1.0
3,096,993	+				+1.1
3,096,993	+				+1.6
3,096,993	+				-0.3
3,096,993	+				+1.5
3,096,993	+				+1.1
3,096,993	+				+0.7
3,096,993	+				+1.3
3,096,993	+				+0.0
3,096,993	+				+0.3
3,096,993	+				+0.1
3,096,993	+				+0.5
3,096,993	+				+0.0
3,096,993	+				-1.0
3,096,994	-				-1.1
3,096,994	-				+1.3
3,096,994	-				+0.6
3,096,994	-				+0.1
3,096,994	-				-1.1
3,096,994	-				-1.8
3,096,994	-				+0.6
3,096,994	-				+2.2
3,096,994	-				+1.2
3,096,994	-				-2.5
3,096,994	-				-1.0
3,096,994	-				-0.9
3,096,994	-				-1.5
3,096,994	-				+1.5
3,096,994	-				-0.7
3,096,994	-				-1.2
3,096,994	-				-0.1
3,096,994	-				-1.5
3,096,994	-				-1.0
3,096,994	-				+1.1
3,096,994	-				-0.8
3,096,994	-				+0.9
3,097,045	+				+2.2
3,097,045	+				+0.7
3,097,045	+				-2.4
3,097,046	-				-2.1
3,097,046	-				-1.2
3,097,059	+				-2.3
3,097,059	+				-1.2
3,097,059	+				-0.8
3,097,059	+				+0.2
3,097,059	+				+1.0
3,097,059	+				-0.4
3,097,059	+				-2.1
3,097,059	+				-1.2
3,097,060	-				+0.2
3,097,060	-				-2.3
3,097,060	-				+0.1
3,097,060	-				+1.1
3,097,060	-				+1.1
3,097,060	-				+3.1
3,097,060	-				+0.1
3,097,060	-				+0.6
3,097,060	-				+1.3
3,097,060	-				+0.6
3,097,060	-				+1.7
3,097,060	-				+0.7
3,097,060	-				-0.6
3,097,063	+				-1.0
3,097,063	+				+0.3
3,097,063	+				+0.5
3,097,063	+				-3.0
3,097,063	+				-1.8
3,097,063	+				-0.2
3,097,063	+				+1.2
3,097,063	+				+0.0
3,097,063	+				-0.7
3,097,064	-				-0.8
3,097,064	-				-0.8
3,097,064	-				-0.1
3,097,064	-				+1.9
3,097,064	-				+1.5
3,097,064	-				+1.4
3,097,064	-				+1.2
3,097,085	-				-0.8
3,097,088	-				+1.7
3,097,088	-				+0.4
3,097,088	-				-0.9
3,097,088	-				+1.0
3,097,107	-				+0.0
3,097,107	-				-2.7
3,097,118	+				+1.1
3,097,118	+				+0.3
3,097,118	+				-0.5
3,097,118	+				+1.3
3,097,119	-				-2.0
3,097,119	-				-0.5
3,097,119	-				-0.6
3,097,119	-				-2.4
3,097,125	+				-0.9
3,097,140	+				-0.1
3,097,140	+				+0.9
3,097,140	+				-1.1
3,097,140	+				+1.3
3,097,140	+				-0.8
3,097,140	+				+0.6
3,097,140	+				-0.3
3,097,140	+				-1.0
3,097,141	-				+0.5
3,097,141	-				+0.8
3,097,141	-				+0.4
3,097,141	-				-0.8
3,097,141	-				-0.3
3,097,154	+				-1.9
3,097,154	+				+0.9
3,097,154	+				+0.3
3,097,163	+				+0.9
3,097,163	+				+0.1
3,097,163	+				-1.4
3,097,164	-				+0.3
3,097,164	-				-1.8
3,097,164	-				+0.6
3,097,164	-				+1.1
3,097,173	+				-0.2
3,097,173	+				-2.2
3,097,173	+				-0.0
3,097,173	+				-1.1
3,097,173	+				+0.9
3,097,173	+				+2.5
3,097,173	+				+0.6
3,097,173	+				+2.0
3,097,173	+				-0.1
3,097,173	+				-0.6
3,097,173	+				+0.3
3,097,173	+				-3.0
3,097,173	+				+0.3
3,097,173	+				-1.4
3,097,173	+				-0.3
3,097,173	+				+2.7
3,097,174	-				+1.5
3,097,174	-				-0.8
3,097,174	-				+0.7
3,097,174	-				+1.8
3,097,174	-				-2.3
3,097,174	-				-0.3
3,097,174	-				-2.0
3,097,174	-				-0.8
3,097,174	-				+0.1
3,097,177	+				-2.9
3,097,177	+				+1.9
3,097,177	+				+0.3
3,097,177	+				+0.4
3,097,177	+				-0.3
3,097,177	+				+2.3
3,097,177	+				-0.9
3,097,177	+				-1.1
3,097,177	+				+0.0
3,097,177	+				+2.9
3,097,177	+				-1.5
3,097,178	-				+1.8
3,097,178	-				+0.2
3,097,178	-				+0.9
3,097,178	-				+0.6
3,097,178	-				-0.7
3,097,178	-				+0.3
3,097,178	-				+0.0
3,097,178	-				-0.8
3,097,178	-				-0.1
3,097,178	-				+1.1
3,097,178	-				-0.3
3,097,178	-				-1.0
3,097,187	+				-2.3
3,097,187	+				-0.7
3,097,187	+				-1.4
3,097,187	+				+1.2
3,097,187	+				+1.0
3,097,187	+				-1.0
3,097,188	-				-1.9
3,097,188	-				+0.4
3,097,188	-				+0.1
3,097,188	-				+0.0
3,097,188	-				+2.3
3,097,188	-				-1.3
3,097,189	+				+1.2
3,097,189	+				+0.8
3,097,189	+				-3.0
3,097,189	+				+1.1
3,097,189	+				-0.7
3,097,189	+				-0.3
3,097,190	+				-0.9
3,097,190	-				-2.5
3,097,190	-				-1.2
3,097,214	+				+1.9
3,097,214	+				+0.4
3,097,214	+				-2.1
3,097,214	+				-0.7
3,097,215	-				+1.0
3,097,215	-				+1.6
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3,099,187	-				+1.2
3,099,196	+				+1.2
3,099,196	+				+0.2
3,099,197	-				-0.2
3,099,208	-				+0.2
3,099,208	-				-0.3
3,099,208	-				-2.2
3,099,211	+				-2.2
3,099,211	+				-2.0
3,099,211	+				-0.5
3,099,211	+				-0.2
3,099,211	+				-0.5
3,099,211	+				+0.5
3,099,211	+				+0.3
3,099,211	+				-0.3
3,099,212	-				+0.4
3,099,212	-				+0.8
3,099,212	-				+0.1
3,099,212	-				-0.7
3,099,212	-				+0.9
3,099,212	-				+0.7
3,099,212	-				+1.1
3,099,212	-				+1.7
3,099,212	-				-2.7
3,099,212	-				+0.2
3,099,212	-				-0.4
3,099,212	-				-3.3
3,099,212	-				+0.7
3,099,212	-				-0.4
3,099,212	-				+0.8
3,099,212	-				-0.9
3,099,212	-				+0.4
3,099,214	+				+0.6
3,099,214	+				-0.1
3,099,214	+				-1.7
3,099,215	-				+0.6
3,099,215	-				-1.0
3,099,215	-				+0.8
3,099,215	-				+1.0
3,099,217	+				+2.2
3,099,217	+				+1.5
3,099,218	-				+1.0
3,099,218	-				-0.2
3,099,218	-				+1.2
3,099,218	-				+0.1
3,099,218	-				+0.8
3,099,218	-				-0.8
3,099,218	-				+0.1
3,099,218	-				-2.8
3,099,221	+				-0.5
3,099,221	+				+0.8
3,099,221	+				-2.3
3,099,222	-				+1.2
3,099,222	-				+0.7
3,099,222	-				+1.9
3,099,222	-				+1.2
3,099,222	-				+2.0