Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03162 and MPMX26_03163 are separated by 3 nucleotides MPMX26_03163 and MPMX26_03164 are separated by 144 nucleotides MPMX26_03164 and MPMX26_03165 overlap by 4 nucleotides MPMX26_03165 and MPMX26_03166 are separated by 18 nucleotides
MPMX26_03162: MPMX26_03162 - Sensor protein QseC, at 16,652 to 18,022
_03162
MPMX26_03163: MPMX26_03163 - Transcriptional regulatory protein QseB, at 18,026 to 18,691
_03163
MPMX26_03164: MPMX26_03164 - Thiol:disulfide interchange protein DsbD, at 18,836 to 20,764
_03164
MPMX26_03165: MPMX26_03165 - Thiol-disulfide oxidoreductase ResA, at 20,761 to 21,606
_03165
MPMX26_03166: MPMX26_03166 - Thiol:disulfide interchange protein DsbG, at 21,625 to 22,374
_03166
Position (kb) 18
19
20
21 Strain fitness (log2 ratio) -2
-1
0
1
2 at 17.939 kb on - strand at 17.947 kb on + strand at 17.950 kb on - strand at 18.009 kb on + strand at 18.143 kb on + strand, within MPMX26_03163 at 18.245 kb on - strand, within MPMX26_03163 at 18.316 kb on - strand, within MPMX26_03163 at 18.316 kb on - strand, within MPMX26_03163 at 18.316 kb on - strand, within MPMX26_03163 at 18.316 kb on - strand, within MPMX26_03163 at 18.488 kb on - strand, within MPMX26_03163 at 18.517 kb on - strand, within MPMX26_03163 at 18.517 kb on - strand, within MPMX26_03163 at 18.517 kb on - strand, within MPMX26_03163 at 18.517 kb on - strand, within MPMX26_03163 at 18.517 kb on - strand, within MPMX26_03163 at 18.551 kb on - strand, within MPMX26_03163 at 18.660 kb on - strand at 18.697 kb on - strand at 18.707 kb on - strand at 18.855 kb on + strand at 18.898 kb on + strand at 18.908 kb on + strand at 18.917 kb on + strand at 18.917 kb on + strand at 18.925 kb on - strand at 19.018 kb on - strand at 19.051 kb on - strand, within MPMX26_03164 at 19.160 kb on - strand, within MPMX26_03164 at 19.161 kb on + strand, within MPMX26_03164 at 19.161 kb on + strand, within MPMX26_03164 at 19.300 kb on - strand, within MPMX26_03164 at 19.435 kb on - strand, within MPMX26_03164 at 19.439 kb on - strand, within MPMX26_03164 at 19.454 kb on - strand, within MPMX26_03164 at 19.456 kb on + strand, within MPMX26_03164 at 19.466 kb on + strand, within MPMX26_03164 at 19.595 kb on + strand, within MPMX26_03164 at 19.595 kb on + strand, within MPMX26_03164 at 19.595 kb on + strand, within MPMX26_03164 at 19.605 kb on + strand, within MPMX26_03164 at 19.605 kb on + strand, within MPMX26_03164 at 19.691 kb on + strand, within MPMX26_03164 at 19.732 kb on - strand, within MPMX26_03164 at 19.745 kb on + strand, within MPMX26_03164 at 19.862 kb on + strand, within MPMX26_03164 at 19.872 kb on + strand, within MPMX26_03164 at 19.960 kb on + strand, within MPMX26_03164 at 19.960 kb on + strand, within MPMX26_03164 at 19.960 kb on + strand, within MPMX26_03164 at 19.968 kb on - strand, within MPMX26_03164 at 20.084 kb on + strand, within MPMX26_03164 at 20.112 kb on - strand, within MPMX26_03164 at 20.142 kb on + strand, within MPMX26_03164 at 20.147 kb on + strand, within MPMX26_03164 at 20.153 kb on + strand, within MPMX26_03164 at 20.271 kb on + strand, within MPMX26_03164 at 20.371 kb on - strand, within MPMX26_03164 at 20.373 kb on + strand, within MPMX26_03164 at 20.387 kb on + strand, within MPMX26_03164 at 20.395 kb on - strand, within MPMX26_03164 at 20.400 kb on - strand, within MPMX26_03164 at 20.410 kb on + strand, within MPMX26_03164 at 20.410 kb on + strand, within MPMX26_03164 at 20.410 kb on + strand, within MPMX26_03164 at 20.418 kb on - strand, within MPMX26_03164 at 20.431 kb on + strand, within MPMX26_03164 at 20.434 kb on - strand, within MPMX26_03164 at 20.439 kb on - strand, within MPMX26_03164 at 20.449 kb on + strand, within MPMX26_03164 at 20.473 kb on - strand, within MPMX26_03164 at 20.485 kb on + strand, within MPMX26_03164 at 20.498 kb on - strand, within MPMX26_03164 at 20.577 kb on - strand at 20.669 kb on + strand at 20.727 kb on - strand at 20.740 kb on + strand at 20.776 kb on + strand at 20.797 kb on + strand at 20.804 kb on + strand at 20.805 kb on - strand at 20.883 kb on + strand, within MPMX26_03165 at 20.883 kb on + strand, within MPMX26_03165 at 20.891 kb on - strand, within MPMX26_03165 at 20.946 kb on - strand, within MPMX26_03165 at 21.029 kb on + strand, within MPMX26_03165 at 21.039 kb on + strand, within MPMX26_03165 at 21.056 kb on + strand, within MPMX26_03165 at 21.102 kb on + strand, within MPMX26_03165 at 21.135 kb on + strand, within MPMX26_03165 at 21.266 kb on + strand, within MPMX26_03165 at 21.408 kb on - strand, within MPMX26_03165 at 21.427 kb on - strand, within MPMX26_03165 at 21.503 kb on - strand, within MPMX26_03165 at 21.515 kb on + strand, within MPMX26_03165 at 21.528 kb on - strand at 21.557 kb on + strand at 21.637 kb on + strand at 21.679 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 17,939 - +0.5 17,947 + +1.4 17,950 - +1.2 18,009 + +0.8 18,143 + MPMX26_03163 0.18 -0.1 18,245 - MPMX26_03163 0.33 +1.2 18,316 - MPMX26_03163 0.44 +0.3 18,316 - MPMX26_03163 0.44 +1.6 18,316 - MPMX26_03163 0.44 -1.2 18,316 - MPMX26_03163 0.44 +1.2 18,488 - MPMX26_03163 0.69 +0.1 18,517 - MPMX26_03163 0.74 -0.1 18,517 - MPMX26_03163 0.74 +0.3 18,517 - MPMX26_03163 0.74 +0.4 18,517 - MPMX26_03163 0.74 -0.3 18,517 - MPMX26_03163 0.74 +0.4 18,551 - MPMX26_03163 0.79 -2.0 18,660 - -0.0 18,697 - -0.7 18,707 - -0.0 18,855 + +0.4 18,898 + -0.3 18,908 + -1.3 18,917 + +0.1 18,917 + +0.4 18,925 - -0.3 19,018 - -0.3 19,051 - MPMX26_03164 0.11 +0.6 19,160 - MPMX26_03164 0.17 +0.8 19,161 + MPMX26_03164 0.17 -1.0 19,161 + MPMX26_03164 0.17 -1.2 19,300 - MPMX26_03164 0.24 +0.1 19,435 - MPMX26_03164 0.31 +0.3 19,439 - MPMX26_03164 0.31 +1.2 19,454 - MPMX26_03164 0.32 -1.2 19,456 + MPMX26_03164 0.32 +0.4 19,466 + MPMX26_03164 0.33 -0.2 19,595 + MPMX26_03164 0.39 -2.1 19,595 + MPMX26_03164 0.39 +0.8 19,595 + MPMX26_03164 0.39 -0.3 19,605 + MPMX26_03164 0.40 -0.2 19,605 + MPMX26_03164 0.40 +2.2 19,691 + MPMX26_03164 0.44 +0.3 19,732 - MPMX26_03164 0.46 +0.7 19,745 + MPMX26_03164 0.47 +0.7 19,862 + MPMX26_03164 0.53 -1.4 19,872 + MPMX26_03164 0.54 -1.2 19,960 + MPMX26_03164 0.58 +1.1 19,960 + MPMX26_03164 0.58 -0.9 19,960 + MPMX26_03164 0.58 +0.3 19,968 - MPMX26_03164 0.59 +0.8 20,084 + MPMX26_03164 0.65 -0.2 20,112 - MPMX26_03164 0.66 +0.8 20,142 + MPMX26_03164 0.68 -0.6 20,147 + MPMX26_03164 0.68 -0.7 20,153 + MPMX26_03164 0.68 -0.2 20,271 + MPMX26_03164 0.74 -0.4 20,371 - MPMX26_03164 0.80 -0.1 20,373 + MPMX26_03164 0.80 +1.1 20,387 + MPMX26_03164 0.80 +0.5 20,395 - MPMX26_03164 0.81 -1.2 20,400 - MPMX26_03164 0.81 -1.4 20,410 + MPMX26_03164 0.82 +0.6 20,410 + MPMX26_03164 0.82 +1.1 20,410 + MPMX26_03164 0.82 +1.8 20,418 - MPMX26_03164 0.82 -0.0 20,431 + MPMX26_03164 0.83 +2.4 20,434 - MPMX26_03164 0.83 +0.8 20,439 - MPMX26_03164 0.83 +0.8 20,449 + MPMX26_03164 0.84 +1.2 20,473 - MPMX26_03164 0.85 +2.3 20,485 + MPMX26_03164 0.85 +0.4 20,498 - MPMX26_03164 0.86 +0.7 20,577 - +2.2 20,669 + +1.3 20,727 - +0.8 20,740 + +1.3 20,776 + +0.3 20,797 + -0.2 20,804 + +0.5 20,805 - -1.2 20,883 + MPMX26_03165 0.14 -0.7 20,883 + MPMX26_03165 0.14 +0.3 20,891 - MPMX26_03165 0.15 +0.6 20,946 - MPMX26_03165 0.22 +0.8 21,029 + MPMX26_03165 0.32 -1.3 21,039 + MPMX26_03165 0.33 -0.5 21,056 + MPMX26_03165 0.35 +0.3 21,102 + MPMX26_03165 0.40 +0.4 21,135 + MPMX26_03165 0.44 -0.5 21,266 + MPMX26_03165 0.60 +0.0 21,408 - MPMX26_03165 0.76 -2.3 21,427 - MPMX26_03165 0.79 +1.8 21,503 - MPMX26_03165 0.88 +0.3 21,515 + MPMX26_03165 0.89 -1.0 21,528 - -0.6 21,557 + +0.4 21,637 + -1.2 21,679 + +0.1
Or see this region's nucleotide sequence