Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02810 and MPMX26_02811 are separated by 18 nucleotides MPMX26_02811 and MPMX26_02812 are separated by 36 nucleotides
MPMX26_02810: MPMX26_02810 - 3-dehydroquinate synthase, at 2,896,485 to 2,897,570
_02810
MPMX26_02811: MPMX26_02811 - Shikimate kinase 1, at 2,897,589 to 2,898,140
_02811
MPMX26_02812: MPMX26_02812 - Type 3 secretion system secretin, at 2,898,177 to 2,900,357
_02812
Position (kb)
2897
2898
2899 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2897.607 kb on - strand at 2897.607 kb on - strand at 2897.609 kb on - strand at 2897.609 kb on - strand at 2897.609 kb on - strand at 2897.609 kb on - strand at 2898.204 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.208 kb on - strand at 2898.283 kb on - strand at 2898.284 kb on - strand at 2898.293 kb on - strand at 2898.361 kb on - strand at 2898.361 kb on - strand at 2898.361 kb on - strand at 2898.361 kb on - strand at 2898.361 kb on - strand at 2898.378 kb on - strand at 2898.435 kb on - strand, within MPMX26_02812 at 2898.436 kb on - strand, within MPMX26_02812 at 2898.451 kb on - strand, within MPMX26_02812 at 2898.476 kb on - strand, within MPMX26_02812 at 2898.476 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.498 kb on - strand, within MPMX26_02812 at 2898.500 kb on - strand, within MPMX26_02812 at 2898.508 kb on - strand, within MPMX26_02812 at 2898.546 kb on - strand, within MPMX26_02812 at 2898.554 kb on - strand, within MPMX26_02812 at 2898.576 kb on - strand, within MPMX26_02812 at 2898.612 kb on - strand, within MPMX26_02812 at 2898.617 kb on - strand, within MPMX26_02812 at 2898.617 kb on - strand, within MPMX26_02812 at 2898.636 kb on - strand, within MPMX26_02812 at 2898.665 kb on - strand, within MPMX26_02812 at 2898.680 kb on - strand, within MPMX26_02812 at 2898.725 kb on - strand, within MPMX26_02812 at 2898.739 kb on - strand, within MPMX26_02812 at 2898.796 kb on - strand, within MPMX26_02812 at 2898.796 kb on - strand, within MPMX26_02812 at 2898.796 kb on - strand, within MPMX26_02812 at 2898.796 kb on - strand, within MPMX26_02812 at 2898.801 kb on - strand, within MPMX26_02812 at 2898.801 kb on - strand, within MPMX26_02812 at 2898.801 kb on - strand, within MPMX26_02812 at 2898.801 kb on - strand, within MPMX26_02812 at 2898.803 kb on - strand, within MPMX26_02812 at 2898.806 kb on - strand, within MPMX26_02812 at 2898.806 kb on - strand, within MPMX26_02812 at 2898.818 kb on - strand, within MPMX26_02812 at 2898.839 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.883 kb on - strand, within MPMX26_02812 at 2898.885 kb on - strand, within MPMX26_02812 at 2898.885 kb on - strand, within MPMX26_02812 at 2898.929 kb on - strand, within MPMX26_02812 at 2898.934 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.939 kb on - strand, within MPMX26_02812 at 2898.949 kb on - strand, within MPMX26_02812 at 2898.959 kb on - strand, within MPMX26_02812 at 2898.959 kb on - strand, within MPMX26_02812 at 2898.987 kb on - strand, within MPMX26_02812 at 2898.987 kb on - strand, within MPMX26_02812 at 2899.018 kb on - strand, within MPMX26_02812 at 2899.018 kb on - strand, within MPMX26_02812 at 2899.035 kb on - strand, within MPMX26_02812 at 2899.053 kb on - strand, within MPMX26_02812 at 2899.053 kb on - strand, within MPMX26_02812 at 2899.071 kb on - strand, within MPMX26_02812 at 2899.084 kb on - strand, within MPMX26_02812 at 2899.084 kb on - strand, within MPMX26_02812 at 2899.084 kb on - strand, within MPMX26_02812 at 2899.084 kb on - strand, within MPMX26_02812 at 2899.084 kb on - strand, within MPMX26_02812 at 2899.089 kb on - strand, within MPMX26_02812 at 2899.094 kb on - strand, within MPMX26_02812 at 2899.110 kb on - strand, within MPMX26_02812 at 2899.110 kb on - strand, within MPMX26_02812 at 2899.110 kb on - strand, within MPMX26_02812 at 2899.110 kb on - strand, within MPMX26_02812 at 2899.110 kb on - strand, within MPMX26_02812 at 2899.112 kb on - strand, within MPMX26_02812 at 2899.133 kb on - strand, within MPMX26_02812
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 2,897,607 - -4.6 2,897,607 - -3.0 2,897,609 - -3.5 2,897,609 - -2.3 2,897,609 - -4.2 2,897,609 - -4.0 2,898,204 - +0.3 2,898,206 - +0.4 2,898,206 - -0.1 2,898,206 - +0.4 2,898,206 - +0.9 2,898,206 - -0.0 2,898,206 - +0.2 2,898,206 - +0.1 2,898,208 - +0.1 2,898,283 - +0.2 2,898,284 - +0.5 2,898,293 - +0.5 2,898,361 - +0.0 2,898,361 - +0.3 2,898,361 - +1.0 2,898,361 - -0.0 2,898,361 - +0.4 2,898,378 - +1.1 2,898,435 - MPMX26_02812 0.12 +0.3 2,898,436 - MPMX26_02812 0.12 +0.4 2,898,451 - MPMX26_02812 0.13 +1.3 2,898,476 - MPMX26_02812 0.14 +0.5 2,898,476 - MPMX26_02812 0.14 +0.8 2,898,496 - MPMX26_02812 0.15 +0.7 2,898,496 - MPMX26_02812 0.15 +0.9 2,898,496 - MPMX26_02812 0.15 +0.8 2,898,496 - MPMX26_02812 0.15 +1.0 2,898,496 - MPMX26_02812 0.15 -0.2 2,898,496 - MPMX26_02812 0.15 +1.0 2,898,496 - MPMX26_02812 0.15 +0.3 2,898,496 - MPMX26_02812 0.15 +1.0 2,898,496 - MPMX26_02812 0.15 +1.7 2,898,496 - MPMX26_02812 0.15 +1.4 2,898,498 - MPMX26_02812 0.15 -0.8 2,898,500 - MPMX26_02812 0.15 +0.3 2,898,508 - MPMX26_02812 0.15 -0.4 2,898,546 - MPMX26_02812 0.17 +0.5 2,898,554 - MPMX26_02812 0.17 +0.2 2,898,576 - MPMX26_02812 0.18 +0.5 2,898,612 - MPMX26_02812 0.20 +0.5 2,898,617 - MPMX26_02812 0.20 +0.3 2,898,617 - MPMX26_02812 0.20 +0.5 2,898,636 - MPMX26_02812 0.21 +0.3 2,898,665 - MPMX26_02812 0.22 +0.1 2,898,680 - MPMX26_02812 0.23 +0.6 2,898,725 - MPMX26_02812 0.25 +0.9 2,898,739 - MPMX26_02812 0.26 +0.7 2,898,796 - MPMX26_02812 0.28 +0.6 2,898,796 - MPMX26_02812 0.28 +0.6 2,898,796 - MPMX26_02812 0.28 +0.3 2,898,796 - MPMX26_02812 0.28 +0.6 2,898,801 - MPMX26_02812 0.29 +0.1 2,898,801 - MPMX26_02812 0.29 +0.6 2,898,801 - MPMX26_02812 0.29 +0.6 2,898,801 - MPMX26_02812 0.29 +0.4 2,898,803 - MPMX26_02812 0.29 +0.4 2,898,806 - MPMX26_02812 0.29 +0.3 2,898,806 - MPMX26_02812 0.29 +0.4 2,898,818 - MPMX26_02812 0.29 +0.7 2,898,839 - MPMX26_02812 0.30 +0.1 2,898,883 - MPMX26_02812 0.32 +0.8 2,898,883 - MPMX26_02812 0.32 +0.4 2,898,883 - MPMX26_02812 0.32 +0.4 2,898,883 - MPMX26_02812 0.32 +0.6 2,898,883 - MPMX26_02812 0.32 +0.7 2,898,883 - MPMX26_02812 0.32 +1.1 2,898,883 - MPMX26_02812 0.32 +0.6 2,898,883 - MPMX26_02812 0.32 +0.4 2,898,883 - MPMX26_02812 0.32 +1.2 2,898,885 - MPMX26_02812 0.32 +0.5 2,898,885 - MPMX26_02812 0.32 +0.4 2,898,929 - MPMX26_02812 0.34 -0.6 2,898,934 - MPMX26_02812 0.35 +1.1 2,898,939 - MPMX26_02812 0.35 +0.3 2,898,939 - MPMX26_02812 0.35 -0.1 2,898,939 - MPMX26_02812 0.35 +0.4 2,898,939 - MPMX26_02812 0.35 +0.4 2,898,939 - MPMX26_02812 0.35 +0.5 2,898,939 - MPMX26_02812 0.35 +0.8 2,898,939 - MPMX26_02812 0.35 +0.4 2,898,939 - MPMX26_02812 0.35 +0.5 2,898,939 - MPMX26_02812 0.35 +0.7 2,898,949 - MPMX26_02812 0.35 +0.3 2,898,959 - MPMX26_02812 0.36 +0.6 2,898,959 - MPMX26_02812 0.36 +0.2 2,898,987 - MPMX26_02812 0.37 +1.0 2,898,987 - MPMX26_02812 0.37 +0.8 2,899,018 - MPMX26_02812 0.39 -0.1 2,899,018 - MPMX26_02812 0.39 +0.2 2,899,035 - MPMX26_02812 0.39 +0.2 2,899,053 - MPMX26_02812 0.40 +0.8 2,899,053 - MPMX26_02812 0.40 -0.1 2,899,071 - MPMX26_02812 0.41 +1.3 2,899,084 - MPMX26_02812 0.42 +1.2 2,899,084 - MPMX26_02812 0.42 +0.6 2,899,084 - MPMX26_02812 0.42 +0.4 2,899,084 - MPMX26_02812 0.42 +0.4 2,899,084 - MPMX26_02812 0.42 +0.2 2,899,089 - MPMX26_02812 0.42 +0.5 2,899,094 - MPMX26_02812 0.42 +0.0 2,899,110 - MPMX26_02812 0.43 +1.2 2,899,110 - MPMX26_02812 0.43 +0.3 2,899,110 - MPMX26_02812 0.43 +0.4 2,899,110 - MPMX26_02812 0.43 +0.5 2,899,110 - MPMX26_02812 0.43 +1.1 2,899,112 - MPMX26_02812 0.43 -0.1 2,899,133 - MPMX26_02812 0.44 +0.6
Or see this region's nucleotide sequence