Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02538

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02537 and MPMX26_02538 are separated by 272 nucleotidesMPMX26_02538 and MPMX26_02539 are separated by 156 nucleotidesMPMX26_02539 and MPMX26_02540 are separated by 26 nucleotides MPMX26_02537: MPMX26_02537 - hypothetical protein, at 2,624,190 to 2,626,151 _02537 MPMX26_02538: MPMX26_02538 - hypothetical protein, at 2,626,424 to 2,626,756 _02538 MPMX26_02539: MPMX26_02539 - hypothetical protein, at 2,626,913 to 2,627,335 _02539 MPMX26_02540: MPMX26_02540 - Flavodoxin/ferredoxin--NADP reductase, at 2,627,362 to 2,628,123 _02540 Position (kb) 2626 2627Strain fitness (log2 ratio) -2 -1 0 1 2at 2625.426 kb on - strand, within MPMX26_02537at 2625.428 kb on - strand, within MPMX26_02537at 2625.441 kb on - strand, within MPMX26_02537at 2625.446 kb on - strand, within MPMX26_02537at 2625.498 kb on - strand, within MPMX26_02537at 2625.513 kb on - strand, within MPMX26_02537at 2625.528 kb on - strand, within MPMX26_02537at 2625.557 kb on - strand, within MPMX26_02537at 2625.567 kb on - strand, within MPMX26_02537at 2625.708 kb on - strand, within MPMX26_02537at 2625.713 kb on - strand, within MPMX26_02537at 2625.713 kb on - strand, within MPMX26_02537at 2625.713 kb on - strand, within MPMX26_02537at 2625.713 kb on - strand, within MPMX26_02537at 2625.740 kb on - strand, within MPMX26_02537at 2625.740 kb on - strand, within MPMX26_02537at 2625.866 kb on - strand, within MPMX26_02537at 2625.866 kb on - strand, within MPMX26_02537at 2625.972 kb on - strandat 2626.133 kb on - strandat 2626.239 kb on - strandat 2626.337 kb on - strandat 2626.339 kb on + strandat 2626.438 kb on - strandat 2626.443 kb on - strandat 2626.444 kb on - strandat 2626.454 kb on - strandat 2626.462 kb on - strand, within MPMX26_02538at 2626.462 kb on - strand, within MPMX26_02538at 2626.483 kb on - strand, within MPMX26_02538at 2626.491 kb on - strand, within MPMX26_02538at 2626.508 kb on - strand, within MPMX26_02538at 2626.508 kb on - strand, within MPMX26_02538at 2626.510 kb on - strand, within MPMX26_02538at 2626.510 kb on - strand, within MPMX26_02538at 2626.532 kb on - strand, within MPMX26_02538at 2626.553 kb on - strand, within MPMX26_02538at 2626.766 kb on - strandat 2626.766 kb on - strandat 2626.876 kb on + strandat 2626.920 kb on + strandat 2626.920 kb on + strandat 2626.930 kb on + strandat 2626.930 kb on + strandat 2626.930 kb on + strandat 2626.953 kb on + strandat 2626.964 kb on + strand, within MPMX26_02539at 2626.969 kb on + strand, within MPMX26_02539at 2626.969 kb on + strand, within MPMX26_02539at 2626.969 kb on + strand, within MPMX26_02539at 2626.992 kb on + strand, within MPMX26_02539at 2626.992 kb on + strand, within MPMX26_02539at 2626.992 kb on + strand, within MPMX26_02539at 2626.992 kb on + strand, within MPMX26_02539at 2626.992 kb on + strand, within MPMX26_02539at 2627.026 kb on + strand, within MPMX26_02539at 2627.036 kb on + strand, within MPMX26_02539at 2627.036 kb on + strand, within MPMX26_02539at 2627.052 kb on + strand, within MPMX26_02539at 2627.135 kb on + strand, within MPMX26_02539at 2627.165 kb on + strand, within MPMX26_02539at 2627.192 kb on + strand, within MPMX26_02539at 2627.197 kb on + strand, within MPMX26_02539at 2627.202 kb on + strand, within MPMX26_02539at 2627.232 kb on + strand, within MPMX26_02539at 2627.232 kb on + strand, within MPMX26_02539at 2627.244 kb on + strand, within MPMX26_02539at 2627.249 kb on + strand, within MPMX26_02539at 2627.264 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.347 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,625,426 - MPMX26_02537 0.63 +1.1
2,625,428 - MPMX26_02537 0.63 +1.2
2,625,441 - MPMX26_02537 0.64 +1.3
2,625,446 - MPMX26_02537 0.64 +1.9
2,625,498 - MPMX26_02537 0.67 +1.4
2,625,513 - MPMX26_02537 0.67 +0.9
2,625,528 - MPMX26_02537 0.68 +0.9
2,625,557 - MPMX26_02537 0.70 +0.8
2,625,567 - MPMX26_02537 0.70 -1.3
2,625,708 - MPMX26_02537 0.77 +1.1
2,625,713 - MPMX26_02537 0.78 +0.9
2,625,713 - MPMX26_02537 0.78 +1.4
2,625,713 - MPMX26_02537 0.78 +1.4
2,625,713 - MPMX26_02537 0.78 +2.1
2,625,740 - MPMX26_02537 0.79 +0.9
2,625,740 - MPMX26_02537 0.79 +0.6
2,625,866 - MPMX26_02537 0.85 +1.9
2,625,866 - MPMX26_02537 0.85 +1.2
2,625,972 - -1.3
2,626,133 - +2.2
2,626,239 - +0.9
2,626,337 - +0.6
2,626,339 + +0.0
2,626,438 - +0.6
2,626,443 - +0.6
2,626,444 - +1.4
2,626,454 - +1.1
2,626,462 - MPMX26_02538 0.11 +0.7
2,626,462 - MPMX26_02538 0.11 +0.4
2,626,483 - MPMX26_02538 0.18 +0.8
2,626,491 - MPMX26_02538 0.20 +0.4
2,626,508 - MPMX26_02538 0.25 +0.3
2,626,508 - MPMX26_02538 0.25 +1.5
2,626,510 - MPMX26_02538 0.26 +0.2
2,626,510 - MPMX26_02538 0.26 +0.6
2,626,532 - MPMX26_02538 0.32 +1.2
2,626,553 - MPMX26_02538 0.39 +0.6
2,626,766 - +1.9
2,626,766 - +2.0
2,626,876 + -1.0
2,626,920 + -0.6
2,626,920 + -0.2
2,626,930 + -0.8
2,626,930 + -0.9
2,626,930 + -0.7
2,626,953 + +0.0
2,626,964 + MPMX26_02539 0.12 -0.7
2,626,969 + MPMX26_02539 0.13 -0.3
2,626,969 + MPMX26_02539 0.13 -1.3
2,626,969 + MPMX26_02539 0.13 -0.9
2,626,992 + MPMX26_02539 0.19 +0.2
2,626,992 + MPMX26_02539 0.19 +0.3
2,626,992 + MPMX26_02539 0.19 -1.3
2,626,992 + MPMX26_02539 0.19 -1.2
2,626,992 + MPMX26_02539 0.19 -0.5
2,627,026 + MPMX26_02539 0.27 -0.6
2,627,036 + MPMX26_02539 0.29 +0.6
2,627,036 + MPMX26_02539 0.29 -0.7
2,627,052 + MPMX26_02539 0.33 -1.6
2,627,135 + MPMX26_02539 0.52 -0.4
2,627,165 + MPMX26_02539 0.60 -0.4
2,627,192 + MPMX26_02539 0.66 -0.3
2,627,197 + MPMX26_02539 0.67 -0.8
2,627,202 + MPMX26_02539 0.68 -0.5
2,627,232 + MPMX26_02539 0.75 -0.6
2,627,232 + MPMX26_02539 0.75 +0.6
2,627,244 + MPMX26_02539 0.78 -0.9
2,627,249 + MPMX26_02539 0.79 -0.9
2,627,264 + MPMX26_02539 0.83 -1.7
2,627,274 + MPMX26_02539 0.85 -0.2
2,627,274 + MPMX26_02539 0.85 -1.4
2,627,274 + MPMX26_02539 0.85 -0.3
2,627,274 + MPMX26_02539 0.85 -0.9
2,627,274 + MPMX26_02539 0.85 -0.2
2,627,274 + MPMX26_02539 0.85 -2.1
2,627,274 + MPMX26_02539 0.85 +0.2
2,627,274 + MPMX26_02539 0.85 +0.2
2,627,274 + MPMX26_02539 0.85 -0.7
2,627,274 + MPMX26_02539 0.85 -1.2
2,627,274 + MPMX26_02539 0.85 -0.5
2,627,279 + MPMX26_02539 0.87 -1.1
2,627,279 + MPMX26_02539 0.87 -0.6
2,627,279 + MPMX26_02539 0.87 -1.1
2,627,279 + MPMX26_02539 0.87 -0.5
2,627,279 + MPMX26_02539 0.87 -0.6
2,627,347 - +2.1

Or see this region's nucleotide sequence