Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02177 and MPMX26_02178 are separated by 183 nucleotides MPMX26_02178 and MPMX26_02179 are separated by 98 nucleotides MPMX26_02179 and MPMX26_02180 are separated by 112 nucleotides
MPMX26_02177: MPMX26_02177 - Peroxiredoxin, at 2,231,188 to 2,231,655
_02177
MPMX26_02178: MPMX26_02178 - Bifunctional NMN adenylyltransferase/Nudix hydrolase, at 2,231,839 to 2,232,408
_02178
MPMX26_02179: MPMX26_02179 - 2,3-dehydroadipyl-CoA hydratase, at 2,232,507 to 2,233,355
_02179
MPMX26_02180: MPMX26_02180 - malonic semialdehyde reductase RutE, at 2,233,468 to 2,234,250
_02180
Position (kb)
2232
2233
2234 Strain fitness (log2 ratio)
-2
-1
0
1 at 2231.582 kb on + strand, within MPMX26_02177 at 2231.617 kb on + strand at 2231.792 kb on - strand at 2231.865 kb on - strand at 2232.510 kb on + strand at 2232.510 kb on + strand at 2232.510 kb on + strand at 2232.510 kb on + strand at 2232.510 kb on + strand at 2232.517 kb on + strand at 2232.681 kb on + strand, within MPMX26_02179 at 2232.764 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.903 kb on + strand, within MPMX26_02179 at 2232.990 kb on + strand, within MPMX26_02179 at 2232.995 kb on + strand, within MPMX26_02179 at 2233.013 kb on + strand, within MPMX26_02179 at 2233.059 kb on + strand, within MPMX26_02179 at 2233.059 kb on + strand, within MPMX26_02179 at 2233.064 kb on + strand, within MPMX26_02179 at 2233.199 kb on + strand, within MPMX26_02179 at 2233.241 kb on + strand, within MPMX26_02179 at 2233.295 kb on + strand at 2233.295 kb on + strand at 2233.295 kb on + strand at 2233.305 kb on + strand at 2233.512 kb on + strand at 2233.645 kb on + strand, within MPMX26_02180 at 2233.702 kb on + strand, within MPMX26_02180 at 2233.891 kb on + strand, within MPMX26_02180 at 2233.899 kb on + strand, within MPMX26_02180 at 2233.964 kb on + strand, within MPMX26_02180 at 2234.013 kb on + strand, within MPMX26_02180 at 2234.023 kb on + strand, within MPMX26_02180 at 2234.061 kb on + strand, within MPMX26_02180 at 2234.061 kb on + strand, within MPMX26_02180 at 2234.094 kb on + strand, within MPMX26_02180 at 2234.112 kb on + strand, within MPMX26_02180 at 2234.184 kb on + strand at 2234.184 kb on + strand at 2234.184 kb on + strand at 2234.194 kb on + strand at 2234.211 kb on + strand at 2234.211 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 2,231,582 + MPMX26_02177 0.84 +0.5 2,231,617 + -0.3 2,231,792 - -0.1 2,231,865 - +0.7 2,232,510 + -0.2 2,232,510 + +0.0 2,232,510 + -2.2 2,232,510 + +1.1 2,232,510 + -1.3 2,232,517 + +0.0 2,232,681 + MPMX26_02179 0.20 -0.1 2,232,764 + MPMX26_02179 0.30 -0.4 2,232,893 + MPMX26_02179 0.45 +0.3 2,232,893 + MPMX26_02179 0.45 +0.1 2,232,893 + MPMX26_02179 0.45 -0.7 2,232,893 + MPMX26_02179 0.45 +0.7 2,232,893 + MPMX26_02179 0.45 -0.1 2,232,893 + MPMX26_02179 0.45 -0.1 2,232,893 + MPMX26_02179 0.45 +0.5 2,232,893 + MPMX26_02179 0.45 -0.2 2,232,893 + MPMX26_02179 0.45 -0.4 2,232,893 + MPMX26_02179 0.45 +1.3 2,232,893 + MPMX26_02179 0.45 +0.3 2,232,893 + MPMX26_02179 0.45 -0.1 2,232,893 + MPMX26_02179 0.45 -0.5 2,232,893 + MPMX26_02179 0.45 +0.3 2,232,893 + MPMX26_02179 0.45 +1.1 2,232,903 + MPMX26_02179 0.47 -0.0 2,232,990 + MPMX26_02179 0.57 +0.5 2,232,995 + MPMX26_02179 0.57 -0.3 2,233,013 + MPMX26_02179 0.60 -0.1 2,233,059 + MPMX26_02179 0.65 -1.0 2,233,059 + MPMX26_02179 0.65 +0.6 2,233,064 + MPMX26_02179 0.66 +0.5 2,233,199 + MPMX26_02179 0.82 +1.4 2,233,241 + MPMX26_02179 0.86 -0.2 2,233,295 + -0.1 2,233,295 + -0.4 2,233,295 + -0.3 2,233,305 + -0.2 2,233,512 + +1.4 2,233,645 + MPMX26_02180 0.23 -0.2 2,233,702 + MPMX26_02180 0.30 +1.7 2,233,891 + MPMX26_02180 0.54 +0.2 2,233,899 + MPMX26_02180 0.55 +0.4 2,233,964 + MPMX26_02180 0.63 -1.1 2,234,013 + MPMX26_02180 0.70 -1.0 2,234,023 + MPMX26_02180 0.71 +0.1 2,234,061 + MPMX26_02180 0.76 -0.4 2,234,061 + MPMX26_02180 0.76 -0.3 2,234,094 + MPMX26_02180 0.80 -0.8 2,234,112 + MPMX26_02180 0.82 -0.2 2,234,184 + -1.3 2,234,184 + -0.2 2,234,184 + -0.6 2,234,194 + +0.7 2,234,211 + +1.4 2,234,211 + +0.4
Or see this region's nucleotide sequence