Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02164

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02162 and MPMX26_02163 are separated by 30 nucleotidesMPMX26_02163 and MPMX26_02164 are separated by 9 nucleotidesMPMX26_02164 and MPMX26_02165 are separated by 3 nucleotidesMPMX26_02165 and MPMX26_02166 are separated by 168 nucleotides MPMX26_02162: MPMX26_02162 - L-aspartate oxidase, at 2,217,452 to 2,219,104 _02162 MPMX26_02163: MPMX26_02163 - Thymidylate kinase, at 2,219,135 to 2,219,743 _02163 MPMX26_02164: MPMX26_02164 - Endolytic murein transglycosylase, at 2,219,753 to 2,220,796 _02164 MPMX26_02165: MPMX26_02165 - Aminodeoxychorismate lyase, at 2,220,800 to 2,221,612 _02165 MPMX26_02166: MPMX26_02166 - Sulfate-binding protein, at 2,221,781 to 2,222,794 _02166 Position (kb) 2219 2220 2221Strain fitness (log2 ratio) -2 -1 0 1 2at 2218.774 kb on + strand, within MPMX26_02162at 2218.774 kb on + strand, within MPMX26_02162at 2218.774 kb on + strand, within MPMX26_02162at 2218.794 kb on + strand, within MPMX26_02162at 2218.799 kb on + strand, within MPMX26_02162at 2218.915 kb on + strand, within MPMX26_02162at 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.951 kb on + strandat 2218.970 kb on + strandat 2218.979 kb on + strandat 2218.979 kb on + strandat 2219.033 kb on + strandat 2219.084 kb on + strandat 2219.091 kb on - strandat 2219.091 kb on - strandat 2219.096 kb on - strandat 2219.112 kb on - strandat 2219.786 kb on - strandat 2219.791 kb on - strandat 2219.791 kb on - strandat 2219.796 kb on - strandat 2219.796 kb on - strandat 2219.796 kb on - strandat 2219.796 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.836 kb on - strandat 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2220.005 kb on - strand, within MPMX26_02164at 2220.005 kb on - strand, within MPMX26_02164at 2220.062 kb on - strand, within MPMX26_02164at 2220.097 kb on - strand, within MPMX26_02164at 2220.143 kb on - strand, within MPMX26_02164at 2220.143 kb on - strand, within MPMX26_02164at 2220.148 kb on - strand, within MPMX26_02164at 2220.175 kb on - strand, within MPMX26_02164at 2220.193 kb on - strand, within MPMX26_02164at 2220.203 kb on - strand, within MPMX26_02164at 2220.203 kb on - strand, within MPMX26_02164at 2220.208 kb on - strand, within MPMX26_02164at 2220.230 kb on - strand, within MPMX26_02164at 2220.230 kb on - strand, within MPMX26_02164at 2220.904 kb on - strand, within MPMX26_02165at 2220.904 kb on - strand, within MPMX26_02165at 2221.000 kb on - strand, within MPMX26_02165at 2221.034 kb on - strand, within MPMX26_02165at 2221.114 kb on - strand, within MPMX26_02165at 2221.124 kb on - strand, within MPMX26_02165at 2221.142 kb on - strand, within MPMX26_02165at 2221.142 kb on - strand, within MPMX26_02165at 2221.142 kb on - strand, within MPMX26_02165at 2221.142 kb on - strand, within MPMX26_02165at 2221.183 kb on - strand, within MPMX26_02165at 2221.225 kb on - strand, within MPMX26_02165at 2221.225 kb on - strand, within MPMX26_02165at 2221.295 kb on - strand, within MPMX26_02165at 2221.337 kb on - strand, within MPMX26_02165at 2221.337 kb on - strand, within MPMX26_02165at 2221.337 kb on - strand, within MPMX26_02165at 2221.345 kb on - strand, within MPMX26_02165at 2221.345 kb on - strand, within MPMX26_02165at 2221.550 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,218,774 + MPMX26_02162 0.80 +0.6
2,218,774 + MPMX26_02162 0.80 +0.2
2,218,774 + MPMX26_02162 0.80 -0.6
2,218,794 + MPMX26_02162 0.81 +0.3
2,218,799 + MPMX26_02162 0.81 +0.8
2,218,915 + MPMX26_02162 0.89 +0.0
2,218,943 + +0.4
2,218,943 + +1.5
2,218,943 + -0.5
2,218,943 + -0.9
2,218,943 + -0.3
2,218,943 + +0.6
2,218,951 + +0.7
2,218,970 + -2.0
2,218,979 + -0.2
2,218,979 + -0.5
2,219,033 + +0.8
2,219,084 + +0.6
2,219,091 - +0.6
2,219,091 - -0.4
2,219,096 - -0.5
2,219,112 - +0.5
2,219,786 - -0.1
2,219,791 - -1.4
2,219,791 - -1.0
2,219,796 - -1.0
2,219,796 - -1.3
2,219,796 - -0.3
2,219,796 - +0.2
2,219,806 - +1.3
2,219,806 - -1.7
2,219,806 - -1.1
2,219,806 - -1.4
2,219,806 - -1.1
2,219,806 - -0.1
2,219,806 - -0.4
2,219,806 - -0.5
2,219,806 - +0.1
2,219,806 - -1.2
2,219,836 - -1.6
2,219,975 - MPMX26_02164 0.21 -0.7
2,219,975 - MPMX26_02164 0.21 -1.7
2,219,975 - MPMX26_02164 0.21 -1.3
2,219,975 - MPMX26_02164 0.21 +1.1
2,219,975 - MPMX26_02164 0.21 -0.9
2,220,005 - MPMX26_02164 0.24 -2.3
2,220,005 - MPMX26_02164 0.24 +0.0
2,220,062 - MPMX26_02164 0.30 -1.6
2,220,097 - MPMX26_02164 0.33 +0.4
2,220,143 - MPMX26_02164 0.37 -2.4
2,220,143 - MPMX26_02164 0.37 -0.6
2,220,148 - MPMX26_02164 0.38 -0.4
2,220,175 - MPMX26_02164 0.40 -0.3
2,220,193 - MPMX26_02164 0.42 -0.3
2,220,203 - MPMX26_02164 0.43 -1.2
2,220,203 - MPMX26_02164 0.43 -1.0
2,220,208 - MPMX26_02164 0.44 +0.1
2,220,230 - MPMX26_02164 0.46 -0.0
2,220,230 - MPMX26_02164 0.46 -0.4
2,220,904 - MPMX26_02165 0.13 +0.0
2,220,904 - MPMX26_02165 0.13 +0.5
2,221,000 - MPMX26_02165 0.25 +0.8
2,221,034 - MPMX26_02165 0.29 -0.1
2,221,114 - MPMX26_02165 0.39 +0.8
2,221,124 - MPMX26_02165 0.40 +0.8
2,221,142 - MPMX26_02165 0.42 +0.2
2,221,142 - MPMX26_02165 0.42 -0.4
2,221,142 - MPMX26_02165 0.42 -0.3
2,221,142 - MPMX26_02165 0.42 +0.5
2,221,183 - MPMX26_02165 0.47 -0.7
2,221,225 - MPMX26_02165 0.52 +0.8
2,221,225 - MPMX26_02165 0.52 -1.7
2,221,295 - MPMX26_02165 0.61 +1.8
2,221,337 - MPMX26_02165 0.66 +0.6
2,221,337 - MPMX26_02165 0.66 -0.4
2,221,337 - MPMX26_02165 0.66 +0.7
2,221,345 - MPMX26_02165 0.67 +1.9
2,221,345 - MPMX26_02165 0.67 +0.0
2,221,550 - +0.6

Or see this region's nucleotide sequence