Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02162 and MPMX26_02163 are separated by 30 nucleotides MPMX26_02163 and MPMX26_02164 are separated by 9 nucleotides MPMX26_02164 and MPMX26_02165 are separated by 3 nucleotides MPMX26_02165 and MPMX26_02166 are separated by 168 nucleotides
MPMX26_02162: MPMX26_02162 - L-aspartate oxidase, at 2,217,452 to 2,219,104
_02162
MPMX26_02163: MPMX26_02163 - Thymidylate kinase, at 2,219,135 to 2,219,743
_02163
MPMX26_02164: MPMX26_02164 - Endolytic murein transglycosylase, at 2,219,753 to 2,220,796
_02164
MPMX26_02165: MPMX26_02165 - Aminodeoxychorismate lyase, at 2,220,800 to 2,221,612
_02165
MPMX26_02166: MPMX26_02166 - Sulfate-binding protein, at 2,221,781 to 2,222,794
_02166
Position (kb)
2219
2220
2221 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2218.774 kb on + strand, within MPMX26_02162 at 2218.774 kb on + strand, within MPMX26_02162 at 2218.774 kb on + strand, within MPMX26_02162 at 2218.794 kb on + strand, within MPMX26_02162 at 2218.799 kb on + strand, within MPMX26_02162 at 2218.915 kb on + strand, within MPMX26_02162 at 2218.943 kb on + strand at 2218.943 kb on + strand at 2218.943 kb on + strand at 2218.943 kb on + strand at 2218.943 kb on + strand at 2218.943 kb on + strand at 2218.951 kb on + strand at 2218.970 kb on + strand at 2218.979 kb on + strand at 2218.979 kb on + strand at 2219.033 kb on + strand at 2219.084 kb on + strand at 2219.091 kb on - strand at 2219.091 kb on - strand at 2219.096 kb on - strand at 2219.112 kb on - strand at 2219.786 kb on - strand at 2219.791 kb on - strand at 2219.791 kb on - strand at 2219.796 kb on - strand at 2219.796 kb on - strand at 2219.796 kb on - strand at 2219.796 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.806 kb on - strand at 2219.836 kb on - strand at 2219.975 kb on - strand, within MPMX26_02164 at 2219.975 kb on - strand, within MPMX26_02164 at 2219.975 kb on - strand, within MPMX26_02164 at 2219.975 kb on - strand, within MPMX26_02164 at 2219.975 kb on - strand, within MPMX26_02164 at 2220.005 kb on - strand, within MPMX26_02164 at 2220.005 kb on - strand, within MPMX26_02164 at 2220.062 kb on - strand, within MPMX26_02164 at 2220.097 kb on - strand, within MPMX26_02164 at 2220.143 kb on - strand, within MPMX26_02164 at 2220.143 kb on - strand, within MPMX26_02164 at 2220.148 kb on - strand, within MPMX26_02164 at 2220.175 kb on - strand, within MPMX26_02164 at 2220.193 kb on - strand, within MPMX26_02164 at 2220.203 kb on - strand, within MPMX26_02164 at 2220.203 kb on - strand, within MPMX26_02164 at 2220.208 kb on - strand, within MPMX26_02164 at 2220.230 kb on - strand, within MPMX26_02164 at 2220.230 kb on - strand, within MPMX26_02164 at 2220.904 kb on - strand, within MPMX26_02165 at 2220.904 kb on - strand, within MPMX26_02165 at 2221.000 kb on - strand, within MPMX26_02165 at 2221.034 kb on - strand, within MPMX26_02165 at 2221.114 kb on - strand, within MPMX26_02165 at 2221.124 kb on - strand, within MPMX26_02165 at 2221.142 kb on - strand, within MPMX26_02165 at 2221.142 kb on - strand, within MPMX26_02165 at 2221.142 kb on - strand, within MPMX26_02165 at 2221.142 kb on - strand, within MPMX26_02165 at 2221.183 kb on - strand, within MPMX26_02165 at 2221.225 kb on - strand, within MPMX26_02165 at 2221.225 kb on - strand, within MPMX26_02165 at 2221.295 kb on - strand, within MPMX26_02165 at 2221.337 kb on - strand, within MPMX26_02165 at 2221.337 kb on - strand, within MPMX26_02165 at 2221.337 kb on - strand, within MPMX26_02165 at 2221.345 kb on - strand, within MPMX26_02165 at 2221.345 kb on - strand, within MPMX26_02165 at 2221.550 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 2,218,774 + MPMX26_02162 0.80 +0.6 2,218,774 + MPMX26_02162 0.80 +0.2 2,218,774 + MPMX26_02162 0.80 -0.6 2,218,794 + MPMX26_02162 0.81 +0.3 2,218,799 + MPMX26_02162 0.81 +0.8 2,218,915 + MPMX26_02162 0.89 +0.0 2,218,943 + +0.4 2,218,943 + +1.5 2,218,943 + -0.5 2,218,943 + -0.9 2,218,943 + -0.3 2,218,943 + +0.6 2,218,951 + +0.7 2,218,970 + -2.0 2,218,979 + -0.2 2,218,979 + -0.5 2,219,033 + +0.8 2,219,084 + +0.6 2,219,091 - +0.6 2,219,091 - -0.4 2,219,096 - -0.5 2,219,112 - +0.5 2,219,786 - -0.1 2,219,791 - -1.4 2,219,791 - -1.0 2,219,796 - -1.0 2,219,796 - -1.3 2,219,796 - -0.3 2,219,796 - +0.2 2,219,806 - +1.3 2,219,806 - -1.7 2,219,806 - -1.1 2,219,806 - -1.4 2,219,806 - -1.1 2,219,806 - -0.1 2,219,806 - -0.4 2,219,806 - -0.5 2,219,806 - +0.1 2,219,806 - -1.2 2,219,836 - -1.6 2,219,975 - MPMX26_02164 0.21 -0.7 2,219,975 - MPMX26_02164 0.21 -1.7 2,219,975 - MPMX26_02164 0.21 -1.3 2,219,975 - MPMX26_02164 0.21 +1.1 2,219,975 - MPMX26_02164 0.21 -0.9 2,220,005 - MPMX26_02164 0.24 -2.3 2,220,005 - MPMX26_02164 0.24 +0.0 2,220,062 - MPMX26_02164 0.30 -1.6 2,220,097 - MPMX26_02164 0.33 +0.4 2,220,143 - MPMX26_02164 0.37 -2.4 2,220,143 - MPMX26_02164 0.37 -0.6 2,220,148 - MPMX26_02164 0.38 -0.4 2,220,175 - MPMX26_02164 0.40 -0.3 2,220,193 - MPMX26_02164 0.42 -0.3 2,220,203 - MPMX26_02164 0.43 -1.2 2,220,203 - MPMX26_02164 0.43 -1.0 2,220,208 - MPMX26_02164 0.44 +0.1 2,220,230 - MPMX26_02164 0.46 -0.0 2,220,230 - MPMX26_02164 0.46 -0.4 2,220,904 - MPMX26_02165 0.13 +0.0 2,220,904 - MPMX26_02165 0.13 +0.5 2,221,000 - MPMX26_02165 0.25 +0.8 2,221,034 - MPMX26_02165 0.29 -0.1 2,221,114 - MPMX26_02165 0.39 +0.8 2,221,124 - MPMX26_02165 0.40 +0.8 2,221,142 - MPMX26_02165 0.42 +0.2 2,221,142 - MPMX26_02165 0.42 -0.4 2,221,142 - MPMX26_02165 0.42 -0.3 2,221,142 - MPMX26_02165 0.42 +0.5 2,221,183 - MPMX26_02165 0.47 -0.7 2,221,225 - MPMX26_02165 0.52 +0.8 2,221,225 - MPMX26_02165 0.52 -1.7 2,221,295 - MPMX26_02165 0.61 +1.8 2,221,337 - MPMX26_02165 0.66 +0.6 2,221,337 - MPMX26_02165 0.66 -0.4 2,221,337 - MPMX26_02165 0.66 +0.7 2,221,345 - MPMX26_02165 0.67 +1.9 2,221,345 - MPMX26_02165 0.67 +0.0 2,221,550 - +0.6
Or see this region's nucleotide sequence