Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02129

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02128 and MPMX26_02129 are separated by 382 nucleotidesMPMX26_02129 and MPMX26_02130 are separated by 145 nucleotides MPMX26_02128: MPMX26_02128 - hypothetical protein, at 2,184,042 to 2,184,224 _02128 MPMX26_02129: MPMX26_02129 - hypothetical protein, at 2,184,607 to 2,186,181 _02129 MPMX26_02130: MPMX26_02130 - hypothetical protein, at 2,186,327 to 2,187,853 _02130 Position (kb) 2184 2185 2186 2187Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2183.963 kb on + strandat 2184.030 kb on - strandat 2184.094 kb on - strand, within MPMX26_02128at 2184.149 kb on - strand, within MPMX26_02128at 2185.036 kb on - strand, within MPMX26_02129at 2185.987 kb on + strand, within MPMX26_02129at 2185.987 kb on + strand, within MPMX26_02129at 2185.987 kb on + strand, within MPMX26_02129at 2185.987 kb on + strand, within MPMX26_02129at 2185.997 kb on + strand, within MPMX26_02129at 2186.350 kb on - strandat 2186.350 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.360 kb on - strandat 2186.413 kb on - strandat 2186.466 kb on - strandat 2186.468 kb on - strandat 2186.468 kb on - strandat 2186.474 kb on - strandat 2186.476 kb on - strandat 2186.476 kb on - strandat 2186.476 kb on - strandat 2186.476 kb on - strandat 2186.476 kb on - strandat 2186.498 kb on - strand, within MPMX26_02130at 2186.576 kb on - strand, within MPMX26_02130at 2186.576 kb on - strand, within MPMX26_02130at 2186.683 kb on - strand, within MPMX26_02130at 2186.717 kb on - strand, within MPMX26_02130at 2186.717 kb on - strand, within MPMX26_02130at 2186.717 kb on - strand, within MPMX26_02130at 2186.717 kb on - strand, within MPMX26_02130at 2186.832 kb on - strand, within MPMX26_02130at 2186.884 kb on - strand, within MPMX26_02130at 2186.894 kb on - strand, within MPMX26_02130at 2186.911 kb on - strand, within MPMX26_02130at 2186.911 kb on - strand, within MPMX26_02130at 2186.921 kb on - strand, within MPMX26_02130at 2186.995 kb on - strand, within MPMX26_02130at 2186.995 kb on - strand, within MPMX26_02130at 2186.995 kb on - strand, within MPMX26_02130at 2187.005 kb on - strand, within MPMX26_02130at 2187.014 kb on - strand, within MPMX26_02130at 2187.014 kb on - strand, within MPMX26_02130at 2187.035 kb on - strand, within MPMX26_02130

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,183,963 + +1.2
2,184,030 - -0.4
2,184,094 - MPMX26_02128 0.28 -0.0
2,184,149 - MPMX26_02128 0.58 -0.2
2,185,036 - MPMX26_02129 0.27 -0.5
2,185,987 + MPMX26_02129 0.88 +1.7
2,185,987 + MPMX26_02129 0.88 -0.8
2,185,987 + MPMX26_02129 0.88 -0.0
2,185,987 + MPMX26_02129 0.88 -1.2
2,185,997 + MPMX26_02129 0.88 +0.3
2,186,350 - -0.1
2,186,350 - +1.8
2,186,360 - +0.3
2,186,360 - -0.4
2,186,360 - -0.0
2,186,360 - -0.7
2,186,360 - +1.0
2,186,360 - -0.1
2,186,360 - -0.0
2,186,360 - +0.7
2,186,360 - +0.2
2,186,360 - -0.7
2,186,413 - -0.4
2,186,466 - -0.0
2,186,468 - -0.2
2,186,468 - +1.1
2,186,474 - +0.4
2,186,476 - +0.5
2,186,476 - +0.3
2,186,476 - +0.0
2,186,476 - +0.3
2,186,476 - +0.3
2,186,498 - MPMX26_02130 0.11 +0.2
2,186,576 - MPMX26_02130 0.16 +0.6
2,186,576 - MPMX26_02130 0.16 +0.6
2,186,683 - MPMX26_02130 0.23 +0.4
2,186,717 - MPMX26_02130 0.26 +0.6
2,186,717 - MPMX26_02130 0.26 +0.9
2,186,717 - MPMX26_02130 0.26 -0.2
2,186,717 - MPMX26_02130 0.26 -0.2
2,186,832 - MPMX26_02130 0.33 +0.5
2,186,884 - MPMX26_02130 0.36 +0.3
2,186,894 - MPMX26_02130 0.37 +0.3
2,186,911 - MPMX26_02130 0.38 +0.0
2,186,911 - MPMX26_02130 0.38 +0.1
2,186,921 - MPMX26_02130 0.39 -2.9
2,186,995 - MPMX26_02130 0.44 -0.2
2,186,995 - MPMX26_02130 0.44 +1.4
2,186,995 - MPMX26_02130 0.44 -0.4
2,187,005 - MPMX26_02130 0.44 +0.2
2,187,014 - MPMX26_02130 0.45 +0.3
2,187,014 - MPMX26_02130 0.45 -0.0
2,187,035 - MPMX26_02130 0.46 -0.0

Or see this region's nucleotide sequence