Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02032

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02031 and MPMX26_02032 are separated by 137 nucleotidesMPMX26_02032 and MPMX26_02033 are separated by 65 nucleotides MPMX26_02031: MPMX26_02031 - Thiamine-phosphate synthase, at 2,097,795 to 2,098,694 _02031 MPMX26_02032: MPMX26_02032 - hypothetical protein, at 2,098,832 to 2,099,002 _02032 MPMX26_02033: MPMX26_02033 - Adaptive-response sensory-kinase SasA, at 2,099,068 to 2,100,414 _02033 Position (kb) 2098 2099 2100Strain fitness (log2 ratio) -2 -1 0 1 2at 2097.834 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.878 kb on - strandat 2097.935 kb on - strand, within MPMX26_02031at 2097.935 kb on - strand, within MPMX26_02031at 2097.959 kb on - strand, within MPMX26_02031at 2097.959 kb on - strand, within MPMX26_02031at 2097.968 kb on - strand, within MPMX26_02031at 2097.968 kb on - strand, within MPMX26_02031at 2097.968 kb on - strand, within MPMX26_02031at 2097.968 kb on - strand, within MPMX26_02031at 2097.978 kb on - strand, within MPMX26_02031at 2097.978 kb on - strand, within MPMX26_02031at 2097.983 kb on - strand, within MPMX26_02031at 2097.983 kb on - strand, within MPMX26_02031at 2098.004 kb on - strand, within MPMX26_02031at 2098.016 kb on - strand, within MPMX26_02031at 2098.016 kb on - strand, within MPMX26_02031at 2098.016 kb on - strand, within MPMX26_02031at 2098.091 kb on - strand, within MPMX26_02031at 2098.091 kb on - strand, within MPMX26_02031at 2098.262 kb on - strand, within MPMX26_02031at 2098.506 kb on - strand, within MPMX26_02031at 2098.865 kb on + strand, within MPMX26_02032at 2098.870 kb on + strand, within MPMX26_02032at 2098.870 kb on + strand, within MPMX26_02032at 2098.870 kb on + strand, within MPMX26_02032at 2098.870 kb on + strand, within MPMX26_02032at 2098.870 kb on + strand, within MPMX26_02032at 2098.946 kb on + strand, within MPMX26_02032at 2098.946 kb on + strand, within MPMX26_02032at 2098.946 kb on + strand, within MPMX26_02032at 2098.946 kb on + strand, within MPMX26_02032at 2098.949 kb on + strand, within MPMX26_02032at 2098.954 kb on + strand, within MPMX26_02032at 2098.954 kb on + strand, within MPMX26_02032at 2098.959 kb on + strand, within MPMX26_02032at 2098.964 kb on + strand, within MPMX26_02032at 2098.964 kb on + strand, within MPMX26_02032at 2098.964 kb on + strand, within MPMX26_02032at 2098.964 kb on + strand, within MPMX26_02032at 2098.964 kb on + strand, within MPMX26_02032at 2098.964 kb on + strand, within MPMX26_02032at 2098.964 kb on + strand, within MPMX26_02032at 2098.964 kb on + strand, within MPMX26_02032at 2099.718 kb on + strand, within MPMX26_02033

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,097,834 - -1.1
2,097,854 - +1.9
2,097,854 - -1.6
2,097,854 - +1.8
2,097,854 - +1.8
2,097,854 - -0.0
2,097,854 - +0.6
2,097,854 - +0.1
2,097,854 - +0.3
2,097,878 - +0.3
2,097,935 - MPMX26_02031 0.16 +2.1
2,097,935 - MPMX26_02031 0.16 +1.2
2,097,959 - MPMX26_02031 0.18 -0.8
2,097,959 - MPMX26_02031 0.18 -0.8
2,097,968 - MPMX26_02031 0.19 -0.1
2,097,968 - MPMX26_02031 0.19 +1.8
2,097,968 - MPMX26_02031 0.19 +0.2
2,097,968 - MPMX26_02031 0.19 +1.8
2,097,978 - MPMX26_02031 0.20 -0.2
2,097,978 - MPMX26_02031 0.20 +0.1
2,097,983 - MPMX26_02031 0.21 +0.7
2,097,983 - MPMX26_02031 0.21 +0.4
2,098,004 - MPMX26_02031 0.23 -0.3
2,098,016 - MPMX26_02031 0.25 +0.2
2,098,016 - MPMX26_02031 0.25 -1.5
2,098,016 - MPMX26_02031 0.25 -0.7
2,098,091 - MPMX26_02031 0.33 -1.2
2,098,091 - MPMX26_02031 0.33 -2.0
2,098,262 - MPMX26_02031 0.52 +0.3
2,098,506 - MPMX26_02031 0.79 -0.2
2,098,865 + MPMX26_02032 0.19 -0.2
2,098,870 + MPMX26_02032 0.22 +0.8
2,098,870 + MPMX26_02032 0.22 +0.9
2,098,870 + MPMX26_02032 0.22 -0.9
2,098,870 + MPMX26_02032 0.22 +0.1
2,098,870 + MPMX26_02032 0.22 +0.5
2,098,946 + MPMX26_02032 0.67 -0.3
2,098,946 + MPMX26_02032 0.67 +0.5
2,098,946 + MPMX26_02032 0.67 +0.4
2,098,946 + MPMX26_02032 0.67 -0.7
2,098,949 + MPMX26_02032 0.68 +0.5
2,098,954 + MPMX26_02032 0.71 -0.6
2,098,954 + MPMX26_02032 0.71 -0.2
2,098,959 + MPMX26_02032 0.74 +2.1
2,098,964 + MPMX26_02032 0.77 -0.1
2,098,964 + MPMX26_02032 0.77 -0.1
2,098,964 + MPMX26_02032 0.77 +0.1
2,098,964 + MPMX26_02032 0.77 +0.3
2,098,964 + MPMX26_02032 0.77 +0.7
2,098,964 + MPMX26_02032 0.77 +0.1
2,098,964 + MPMX26_02032 0.77 +0.3
2,098,964 + MPMX26_02032 0.77 -0.3
2,099,718 + MPMX26_02033 0.48 +0.5

Or see this region's nucleotide sequence