Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01846 and MPMX26_01847 are separated by 159 nucleotides MPMX26_01847 and MPMX26_01848 are separated by 323 nucleotides MPMX26_01848 and MPMX26_01849 are separated by 378 nucleotides MPMX26_01849 and MPMX26_01850 are separated by 87 nucleotides
MPMX26_01846: MPMX26_01846 - hypothetical protein, at 1,884,681 to 1,885,937
_01846
MPMX26_01847: MPMX26_01847 - tRNA-Met, at 1,886,097 to 1,886,173
_01847
MPMX26_01848: MPMX26_01848 - hypothetical protein, at 1,886,497 to 1,887,351
_01848
MPMX26_01849: MPMX26_01849 - hypothetical protein, at 1,887,730 to 1,887,963
_01849
MPMX26_01850: MPMX26_01850 - hypothetical protein, at 1,888,051 to 1,888,149
_01850
Position (kb)
1886
1887
1888 Strain fitness (log2 ratio)
-1
0
1
2 at 1885.938 kb on + strand at 1886.175 kb on + strand at 1886.175 kb on + strand at 1886.593 kb on - strand, within MPMX26_01848 at 1886.670 kb on - strand, within MPMX26_01848 at 1886.727 kb on - strand, within MPMX26_01848 at 1886.737 kb on - strand, within MPMX26_01848 at 1886.880 kb on - strand, within MPMX26_01848 at 1887.000 kb on - strand, within MPMX26_01848 at 1887.000 kb on - strand, within MPMX26_01848 at 1887.000 kb on - strand, within MPMX26_01848 at 1887.160 kb on - strand, within MPMX26_01848 at 1887.196 kb on - strand, within MPMX26_01848 at 1887.246 kb on - strand, within MPMX26_01848 at 1887.246 kb on - strand, within MPMX26_01848 at 1887.246 kb on - strand, within MPMX26_01848 at 1887.246 kb on - strand, within MPMX26_01848 at 1887.246 kb on - strand, within MPMX26_01848 at 1887.246 kb on - strand, within MPMX26_01848 at 1887.282 kb on - strand at 1887.282 kb on - strand at 1887.282 kb on - strand at 1887.306 kb on - strand at 1887.306 kb on - strand at 1887.738 kb on + strand at 1887.841 kb on + strand, within MPMX26_01849
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 1,885,938 + -1.7 1,886,175 + -0.8 1,886,175 + +0.2 1,886,593 - MPMX26_01848 0.11 +1.2 1,886,670 - MPMX26_01848 0.20 +0.0 1,886,727 - MPMX26_01848 0.27 -0.6 1,886,737 - MPMX26_01848 0.28 -0.0 1,886,880 - MPMX26_01848 0.45 +0.1 1,887,000 - MPMX26_01848 0.59 +1.2 1,887,000 - MPMX26_01848 0.59 -1.2 1,887,000 - MPMX26_01848 0.59 -0.0 1,887,160 - MPMX26_01848 0.78 -0.1 1,887,196 - MPMX26_01848 0.82 +0.4 1,887,246 - MPMX26_01848 0.88 -1.1 1,887,246 - MPMX26_01848 0.88 +0.7 1,887,246 - MPMX26_01848 0.88 +0.3 1,887,246 - MPMX26_01848 0.88 -0.3 1,887,246 - MPMX26_01848 0.88 +0.9 1,887,246 - MPMX26_01848 0.88 +1.8 1,887,282 - -0.2 1,887,282 - +0.0 1,887,282 - -0.1 1,887,306 - -0.0 1,887,306 - +0.2 1,887,738 + +1.3 1,887,841 + MPMX26_01849 0.47 +0.1
Or see this region's nucleotide sequence