Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01848

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01846 and MPMX26_01847 are separated by 159 nucleotidesMPMX26_01847 and MPMX26_01848 are separated by 323 nucleotidesMPMX26_01848 and MPMX26_01849 are separated by 378 nucleotidesMPMX26_01849 and MPMX26_01850 are separated by 87 nucleotides MPMX26_01846: MPMX26_01846 - hypothetical protein, at 1,884,681 to 1,885,937 _01846 MPMX26_01847: MPMX26_01847 - tRNA-Met, at 1,886,097 to 1,886,173 _01847 MPMX26_01848: MPMX26_01848 - hypothetical protein, at 1,886,497 to 1,887,351 _01848 MPMX26_01849: MPMX26_01849 - hypothetical protein, at 1,887,730 to 1,887,963 _01849 MPMX26_01850: MPMX26_01850 - hypothetical protein, at 1,888,051 to 1,888,149 _01850 Position (kb) 1886 1887 1888Strain fitness (log2 ratio) -1 0 1 2at 1885.938 kb on + strandat 1886.175 kb on + strandat 1886.175 kb on + strandat 1886.593 kb on - strand, within MPMX26_01848at 1886.670 kb on - strand, within MPMX26_01848at 1886.727 kb on - strand, within MPMX26_01848at 1886.737 kb on - strand, within MPMX26_01848at 1886.880 kb on - strand, within MPMX26_01848at 1887.000 kb on - strand, within MPMX26_01848at 1887.000 kb on - strand, within MPMX26_01848at 1887.000 kb on - strand, within MPMX26_01848at 1887.160 kb on - strand, within MPMX26_01848at 1887.196 kb on - strand, within MPMX26_01848at 1887.246 kb on - strand, within MPMX26_01848at 1887.246 kb on - strand, within MPMX26_01848at 1887.246 kb on - strand, within MPMX26_01848at 1887.246 kb on - strand, within MPMX26_01848at 1887.246 kb on - strand, within MPMX26_01848at 1887.246 kb on - strand, within MPMX26_01848at 1887.282 kb on - strandat 1887.282 kb on - strandat 1887.282 kb on - strandat 1887.306 kb on - strandat 1887.306 kb on - strandat 1887.738 kb on + strandat 1887.841 kb on + strand, within MPMX26_01849

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,885,938 + -1.7
1,886,175 + -0.8
1,886,175 + +0.2
1,886,593 - MPMX26_01848 0.11 +1.2
1,886,670 - MPMX26_01848 0.20 +0.0
1,886,727 - MPMX26_01848 0.27 -0.6
1,886,737 - MPMX26_01848 0.28 -0.0
1,886,880 - MPMX26_01848 0.45 +0.1
1,887,000 - MPMX26_01848 0.59 +1.2
1,887,000 - MPMX26_01848 0.59 -1.2
1,887,000 - MPMX26_01848 0.59 -0.0
1,887,160 - MPMX26_01848 0.78 -0.1
1,887,196 - MPMX26_01848 0.82 +0.4
1,887,246 - MPMX26_01848 0.88 -1.1
1,887,246 - MPMX26_01848 0.88 +0.7
1,887,246 - MPMX26_01848 0.88 +0.3
1,887,246 - MPMX26_01848 0.88 -0.3
1,887,246 - MPMX26_01848 0.88 +0.9
1,887,246 - MPMX26_01848 0.88 +1.8
1,887,282 - -0.2
1,887,282 - +0.0
1,887,282 - -0.1
1,887,306 - -0.0
1,887,306 - +0.2
1,887,738 + +1.3
1,887,841 + MPMX26_01849 0.47 +0.1

Or see this region's nucleotide sequence