Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01752

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01750 and MPMX26_01751 are separated by 228 nucleotidesMPMX26_01751 and MPMX26_01752 are separated by 87 nucleotidesMPMX26_01752 and MPMX26_01753 are separated by 92 nucleotides MPMX26_01750: MPMX26_01750 - 3-ketoacyl-CoA thiolase FadI, at 1,807,562 to 1,809,052 _01750 MPMX26_01751: MPMX26_01751 - hypothetical protein, at 1,809,281 to 1,809,706 _01751 MPMX26_01752: MPMX26_01752 - hypothetical protein, at 1,809,794 to 1,810,681 _01752 MPMX26_01753: MPMX26_01753 - Transaldolase, at 1,810,774 to 1,811,763 _01753 Position (kb) 1809 1810 1811Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1808.839 kb on + strand, within MPMX26_01750at 1809.017 kb on + strandat 1809.025 kb on + strandat 1809.025 kb on + strandat 1809.425 kb on - strand, within MPMX26_01751at 1809.583 kb on + strand, within MPMX26_01751at 1809.962 kb on + strand, within MPMX26_01752at 1810.073 kb on + strand, within MPMX26_01752at 1810.097 kb on + strand, within MPMX26_01752at 1810.139 kb on + strand, within MPMX26_01752at 1810.310 kb on + strand, within MPMX26_01752at 1810.624 kb on + strandat 1810.786 kb on + strandat 1810.786 kb on + strandat 1810.825 kb on + strandat 1810.854 kb on + strandat 1810.875 kb on + strand, within MPMX26_01753at 1810.885 kb on + strand, within MPMX26_01753at 1811.011 kb on + strand, within MPMX26_01753at 1811.101 kb on + strand, within MPMX26_01753at 1811.109 kb on + strand, within MPMX26_01753at 1811.111 kb on + strand, within MPMX26_01753at 1811.151 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.191 kb on + strand, within MPMX26_01753at 1811.191 kb on + strand, within MPMX26_01753at 1811.191 kb on + strand, within MPMX26_01753at 1811.191 kb on + strand, within MPMX26_01753at 1811.224 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.259 kb on + strand, within MPMX26_01753at 1811.266 kb on + strand, within MPMX26_01753at 1811.283 kb on + strand, within MPMX26_01753at 1811.358 kb on + strand, within MPMX26_01753at 1811.380 kb on + strand, within MPMX26_01753at 1811.419 kb on + strand, within MPMX26_01753at 1811.419 kb on + strand, within MPMX26_01753at 1811.419 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.437 kb on + strand, within MPMX26_01753at 1811.473 kb on + strand, within MPMX26_01753at 1811.473 kb on + strand, within MPMX26_01753at 1811.473 kb on + strand, within MPMX26_01753at 1811.473 kb on + strand, within MPMX26_01753at 1811.480 kb on + strand, within MPMX26_01753at 1811.481 kb on - strand, within MPMX26_01753at 1811.499 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.590 kb on + strand, within MPMX26_01753at 1811.608 kb on + strand, within MPMX26_01753at 1811.608 kb on + strand, within MPMX26_01753at 1811.608 kb on + strand, within MPMX26_01753at 1811.617 kb on + strand, within MPMX26_01753at 1811.617 kb on + strand, within MPMX26_01753at 1811.617 kb on + strand, within MPMX26_01753at 1811.649 kb on + strand, within MPMX26_01753

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,808,839 + MPMX26_01750 0.86 +0.1
1,809,017 + +0.2
1,809,025 + -0.3
1,809,025 + +0.2
1,809,425 - MPMX26_01751 0.34 +0.1
1,809,583 + MPMX26_01751 0.71 -1.5
1,809,962 + MPMX26_01752 0.19 +0.3
1,810,073 + MPMX26_01752 0.31 -0.3
1,810,097 + MPMX26_01752 0.34 +1.4
1,810,139 + MPMX26_01752 0.39 +1.6
1,810,310 + MPMX26_01752 0.58 +1.4
1,810,624 + -1.6
1,810,786 + -3.2
1,810,786 + -1.4
1,810,825 + -4.0
1,810,854 + -3.2
1,810,875 + MPMX26_01753 0.10 -3.1
1,810,885 + MPMX26_01753 0.11 -4.7
1,811,011 + MPMX26_01753 0.24 -4.0
1,811,101 + MPMX26_01753 0.33 -3.8
1,811,109 + MPMX26_01753 0.34 -3.5
1,811,111 + MPMX26_01753 0.34 -0.2
1,811,151 + MPMX26_01753 0.38 -4.2
1,811,166 + MPMX26_01753 0.40 -3.8
1,811,166 + MPMX26_01753 0.40 -3.1
1,811,166 + MPMX26_01753 0.40 -4.2
1,811,166 + MPMX26_01753 0.40 -2.5
1,811,166 + MPMX26_01753 0.40 -2.1
1,811,166 + MPMX26_01753 0.40 -1.6
1,811,191 + MPMX26_01753 0.42 -0.7
1,811,191 + MPMX26_01753 0.42 -4.5
1,811,191 + MPMX26_01753 0.42 -4.5
1,811,191 + MPMX26_01753 0.42 -4.2
1,811,224 + MPMX26_01753 0.45 -4.6
1,811,236 + MPMX26_01753 0.47 -3.6
1,811,236 + MPMX26_01753 0.47 -2.4
1,811,236 + MPMX26_01753 0.47 -4.1
1,811,236 + MPMX26_01753 0.47 -1.8
1,811,236 + MPMX26_01753 0.47 -5.1
1,811,236 + MPMX26_01753 0.47 -0.6
1,811,236 + MPMX26_01753 0.47 -3.1
1,811,236 + MPMX26_01753 0.47 -4.4
1,811,236 + MPMX26_01753 0.47 -4.6
1,811,236 + MPMX26_01753 0.47 -3.5
1,811,236 + MPMX26_01753 0.47 -4.6
1,811,259 + MPMX26_01753 0.49 -3.5
1,811,266 + MPMX26_01753 0.50 -2.7
1,811,283 + MPMX26_01753 0.51 -5.0
1,811,358 + MPMX26_01753 0.59 -2.7
1,811,380 + MPMX26_01753 0.61 -3.3
1,811,419 + MPMX26_01753 0.65 -3.4
1,811,419 + MPMX26_01753 0.65 -3.0
1,811,419 + MPMX26_01753 0.65 -4.9
1,811,425 + MPMX26_01753 0.66 -4.2
1,811,425 + MPMX26_01753 0.66 -3.6
1,811,425 + MPMX26_01753 0.66 -4.0
1,811,425 + MPMX26_01753 0.66 -4.9
1,811,425 + MPMX26_01753 0.66 -5.6
1,811,437 + MPMX26_01753 0.67 -4.1
1,811,473 + MPMX26_01753 0.71 -1.6
1,811,473 + MPMX26_01753 0.71 -4.1
1,811,473 + MPMX26_01753 0.71 -3.6
1,811,473 + MPMX26_01753 0.71 -4.6
1,811,480 + MPMX26_01753 0.71 -1.1
1,811,481 - MPMX26_01753 0.71 -0.8
1,811,499 + MPMX26_01753 0.73 -4.7
1,811,560 + MPMX26_01753 0.79 -4.6
1,811,560 + MPMX26_01753 0.79 -4.3
1,811,560 + MPMX26_01753 0.79 -4.1
1,811,560 + MPMX26_01753 0.79 -3.4
1,811,560 + MPMX26_01753 0.79 -4.5
1,811,560 + MPMX26_01753 0.79 -3.9
1,811,590 + MPMX26_01753 0.82 -4.4
1,811,608 + MPMX26_01753 0.84 -2.9
1,811,608 + MPMX26_01753 0.84 -3.7
1,811,608 + MPMX26_01753 0.84 -3.8
1,811,617 + MPMX26_01753 0.85 -4.7
1,811,617 + MPMX26_01753 0.85 -4.0
1,811,617 + MPMX26_01753 0.85 -3.5
1,811,649 + MPMX26_01753 0.88 -4.3

Or see this region's nucleotide sequence