Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01646

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01645 and MPMX26_01646 are separated by 131 nucleotidesMPMX26_01646 and MPMX26_01647 overlap by 4 nucleotides MPMX26_01645: MPMX26_01645 - O-succinylhomoserine sulfhydrylase, at 1,704,428 to 1,705,615 _01645 MPMX26_01646: MPMX26_01646 - Poly(3-hydroxyalkanoate) polymerase subunit PhaC, at 1,705,747 to 1,706,853 _01646 MPMX26_01647: MPMX26_01647 - 2-(hydroxymethyl)glutarate dehydrogenase, at 1,706,850 to 1,707,722 _01647 Position (kb) 1705 1706 1707Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 1704.750 kb on - strand, within MPMX26_01645at 1704.786 kb on - strand, within MPMX26_01645at 1704.804 kb on - strand, within MPMX26_01645at 1704.817 kb on - strand, within MPMX26_01645at 1704.827 kb on - strand, within MPMX26_01645at 1704.840 kb on - strand, within MPMX26_01645at 1704.840 kb on - strand, within MPMX26_01645at 1704.849 kb on - strand, within MPMX26_01645at 1704.897 kb on - strand, within MPMX26_01645at 1704.897 kb on - strand, within MPMX26_01645at 1704.897 kb on - strand, within MPMX26_01645at 1704.897 kb on - strand, within MPMX26_01645at 1704.902 kb on - strand, within MPMX26_01645at 1704.944 kb on - strand, within MPMX26_01645at 1704.944 kb on - strand, within MPMX26_01645at 1704.951 kb on - strand, within MPMX26_01645at 1704.951 kb on - strand, within MPMX26_01645at 1704.951 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.968 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1705.001 kb on - strand, within MPMX26_01645at 1705.014 kb on - strand, within MPMX26_01645at 1705.039 kb on - strand, within MPMX26_01645at 1705.070 kb on - strand, within MPMX26_01645at 1705.080 kb on - strand, within MPMX26_01645at 1705.085 kb on - strand, within MPMX26_01645at 1705.085 kb on - strand, within MPMX26_01645at 1705.085 kb on - strand, within MPMX26_01645at 1705.085 kb on - strand, within MPMX26_01645at 1705.141 kb on - strand, within MPMX26_01645at 1705.180 kb on - strand, within MPMX26_01645at 1705.264 kb on - strand, within MPMX26_01645at 1705.264 kb on - strand, within MPMX26_01645at 1705.264 kb on - strand, within MPMX26_01645at 1705.272 kb on - strand, within MPMX26_01645at 1705.272 kb on - strand, within MPMX26_01645at 1705.290 kb on - strand, within MPMX26_01645at 1705.290 kb on - strand, within MPMX26_01645at 1705.300 kb on - strand, within MPMX26_01645at 1705.322 kb on - strand, within MPMX26_01645at 1705.327 kb on - strand, within MPMX26_01645at 1705.328 kb on - strand, within MPMX26_01645at 1705.339 kb on - strand, within MPMX26_01645at 1705.357 kb on - strand, within MPMX26_01645at 1705.380 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.390 kb on - strand, within MPMX26_01645at 1705.417 kb on - strand, within MPMX26_01645at 1705.435 kb on - strand, within MPMX26_01645at 1705.561 kb on - strandat 1705.613 kb on - strandat 1705.613 kb on - strandat 1705.618 kb on - strandat 1705.618 kb on - strandat 1706.921 kb on + strandat 1706.969 kb on + strand, within MPMX26_01647at 1706.969 kb on + strand, within MPMX26_01647at 1707.068 kb on + strand, within MPMX26_01647at 1707.105 kb on + strand, within MPMX26_01647at 1707.113 kb on + strand, within MPMX26_01647at 1707.113 kb on + strand, within MPMX26_01647at 1707.113 kb on + strand, within MPMX26_01647at 1707.191 kb on + strand, within MPMX26_01647at 1707.261 kb on + strand, within MPMX26_01647at 1707.282 kb on + strand, within MPMX26_01647at 1707.305 kb on + strand, within MPMX26_01647at 1707.327 kb on + strand, within MPMX26_01647at 1707.329 kb on + strand, within MPMX26_01647at 1707.431 kb on + strand, within MPMX26_01647at 1707.534 kb on + strand, within MPMX26_01647at 1707.554 kb on + strand, within MPMX26_01647at 1707.656 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,704,750 - MPMX26_01645 0.27 -0.8
1,704,786 - MPMX26_01645 0.30 -1.5
1,704,804 - MPMX26_01645 0.32 -1.2
1,704,817 - MPMX26_01645 0.33 -2.5
1,704,827 - MPMX26_01645 0.34 -3.1
1,704,840 - MPMX26_01645 0.35 -0.5
1,704,840 - MPMX26_01645 0.35 -1.1
1,704,849 - MPMX26_01645 0.35 +0.2
1,704,897 - MPMX26_01645 0.39 +1.2
1,704,897 - MPMX26_01645 0.39 -0.5
1,704,897 - MPMX26_01645 0.39 -0.2
1,704,897 - MPMX26_01645 0.39 -2.2
1,704,902 - MPMX26_01645 0.40 -5.0
1,704,944 - MPMX26_01645 0.43 -3.9
1,704,944 - MPMX26_01645 0.43 -3.7
1,704,951 - MPMX26_01645 0.44 -2.6
1,704,951 - MPMX26_01645 0.44 -1.3
1,704,951 - MPMX26_01645 0.44 -0.2
1,704,961 - MPMX26_01645 0.45 -3.9
1,704,961 - MPMX26_01645 0.45 -5.2
1,704,961 - MPMX26_01645 0.45 -4.5
1,704,961 - MPMX26_01645 0.45 -4.9
1,704,961 - MPMX26_01645 0.45 -5.1
1,704,968 - MPMX26_01645 0.45 -1.1
1,704,973 - MPMX26_01645 0.46 -3.6
1,704,973 - MPMX26_01645 0.46 -4.1
1,704,973 - MPMX26_01645 0.46 -4.1
1,704,973 - MPMX26_01645 0.46 -2.6
1,704,973 - MPMX26_01645 0.46 -4.8
1,704,973 - MPMX26_01645 0.46 -5.2
1,705,001 - MPMX26_01645 0.48 -4.9
1,705,014 - MPMX26_01645 0.49 -2.6
1,705,039 - MPMX26_01645 0.51 -3.8
1,705,070 - MPMX26_01645 0.54 -0.9
1,705,080 - MPMX26_01645 0.55 +0.5
1,705,085 - MPMX26_01645 0.55 -4.4
1,705,085 - MPMX26_01645 0.55 -4.6
1,705,085 - MPMX26_01645 0.55 -2.5
1,705,085 - MPMX26_01645 0.55 -3.1
1,705,141 - MPMX26_01645 0.60 -4.0
1,705,180 - MPMX26_01645 0.63 -4.2
1,705,264 - MPMX26_01645 0.70 -4.6
1,705,264 - MPMX26_01645 0.70 -4.7
1,705,264 - MPMX26_01645 0.70 -4.9
1,705,272 - MPMX26_01645 0.71 +0.2
1,705,272 - MPMX26_01645 0.71 -0.5
1,705,290 - MPMX26_01645 0.73 -3.1
1,705,290 - MPMX26_01645 0.73 -1.2
1,705,300 - MPMX26_01645 0.73 -5.7
1,705,322 - MPMX26_01645 0.75 -3.0
1,705,327 - MPMX26_01645 0.76 -3.0
1,705,328 - MPMX26_01645 0.76 -3.0
1,705,339 - MPMX26_01645 0.77 -4.2
1,705,357 - MPMX26_01645 0.78 -4.0
1,705,380 - MPMX26_01645 0.80 -1.6
1,705,390 - MPMX26_01645 0.81 -4.2
1,705,390 - MPMX26_01645 0.81 -5.8
1,705,390 - MPMX26_01645 0.81 -2.4
1,705,390 - MPMX26_01645 0.81 -4.9
1,705,390 - MPMX26_01645 0.81 -4.9
1,705,390 - MPMX26_01645 0.81 -4.1
1,705,390 - MPMX26_01645 0.81 -3.6
1,705,390 - MPMX26_01645 0.81 -3.0
1,705,390 - MPMX26_01645 0.81 -3.7
1,705,390 - MPMX26_01645 0.81 -4.6
1,705,390 - MPMX26_01645 0.81 -4.3
1,705,390 - MPMX26_01645 0.81 -5.6
1,705,417 - MPMX26_01645 0.83 -4.4
1,705,435 - MPMX26_01645 0.85 -3.9
1,705,561 - -1.6
1,705,613 - -5.0
1,705,613 - -3.7
1,705,618 - -1.5
1,705,618 - -3.1
1,706,921 + +0.0
1,706,969 + MPMX26_01647 0.14 +0.3
1,706,969 + MPMX26_01647 0.14 +1.0
1,707,068 + MPMX26_01647 0.25 +0.3
1,707,105 + MPMX26_01647 0.29 -1.3
1,707,113 + MPMX26_01647 0.30 +0.4
1,707,113 + MPMX26_01647 0.30 -0.2
1,707,113 + MPMX26_01647 0.30 +0.4
1,707,191 + MPMX26_01647 0.39 -0.8
1,707,261 + MPMX26_01647 0.47 +1.2
1,707,282 + MPMX26_01647 0.49 -0.2
1,707,305 + MPMX26_01647 0.52 +0.2
1,707,327 + MPMX26_01647 0.55 +0.8
1,707,329 + MPMX26_01647 0.55 -0.5
1,707,431 + MPMX26_01647 0.67 +0.0
1,707,534 + MPMX26_01647 0.78 +0.5
1,707,554 + MPMX26_01647 0.81 -0.5
1,707,656 + +0.7

Or see this region's nucleotide sequence