Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01452

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01451 and MPMX26_01452 overlap by 4 nucleotidesMPMX26_01452 and MPMX26_01453 are separated by 268 nucleotidesMPMX26_01453 and MPMX26_01454 are separated by 283 nucleotides MPMX26_01451: MPMX26_01451 - putative MFS-type transporter YhhS, at 1,503,033 to 1,504,235 _01451 MPMX26_01452: MPMX26_01452 - hypothetical protein, at 1,504,232 to 1,504,669 _01452 MPMX26_01453: MPMX26_01453 - hypothetical protein, at 1,504,938 to 1,505,372 _01453 MPMX26_01454: MPMX26_01454 - Cytochrome bd ubiquinol oxidase subunit 1, at 1,505,656 to 1,507,101 _01454 Position (kb) 1504 1505Strain fitness (log2 ratio) -1 0 1at 1504.261 kb on - strandat 1504.295 kb on - strand, within MPMX26_01452at 1504.319 kb on - strand, within MPMX26_01452at 1504.319 kb on - strand, within MPMX26_01452at 1504.384 kb on - strand, within MPMX26_01452at 1504.384 kb on - strand, within MPMX26_01452at 1504.452 kb on - strand, within MPMX26_01452at 1504.558 kb on - strand, within MPMX26_01452at 1504.607 kb on - strand, within MPMX26_01452at 1505.624 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,504,261 - +0.3
1,504,295 - MPMX26_01452 0.14 -1.1
1,504,319 - MPMX26_01452 0.20 -0.6
1,504,319 - MPMX26_01452 0.20 -0.2
1,504,384 - MPMX26_01452 0.35 -0.5
1,504,384 - MPMX26_01452 0.35 +0.5
1,504,452 - MPMX26_01452 0.50 -0.0
1,504,558 - MPMX26_01452 0.74 +0.1
1,504,607 - MPMX26_01452 0.86 -0.1
1,505,624 + +0.5

Or see this region's nucleotide sequence