Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01249

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01248 and MPMX26_01249 are separated by 253 nucleotidesMPMX26_01249 and MPMX26_01250 are separated by 52 nucleotides MPMX26_01248: MPMX26_01248 - D-amino acid dehydrogenase, at 1,319,484 to 1,320,764 _01248 MPMX26_01249: MPMX26_01249 - HTH-type transcriptional regulator HdfR, at 1,321,018 to 1,321,962 _01249 MPMX26_01250: MPMX26_01250 - hypothetical protein, at 1,322,015 to 1,323,142 _01250 Position (kb) 1321 1322Strain fitness (log2 ratio) -3 -2 -1 0 1at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.041 kb on - strand, within MPMX26_01248at 1320.041 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.061 kb on - strand, within MPMX26_01248at 1320.066 kb on - strand, within MPMX26_01248at 1320.066 kb on - strand, within MPMX26_01248at 1320.200 kb on - strand, within MPMX26_01248at 1320.307 kb on - strand, within MPMX26_01248at 1320.345 kb on - strand, within MPMX26_01248at 1320.355 kb on - strand, within MPMX26_01248at 1320.362 kb on - strand, within MPMX26_01248at 1320.426 kb on - strand, within MPMX26_01248at 1320.426 kb on - strand, within MPMX26_01248at 1320.455 kb on - strand, within MPMX26_01248at 1320.473 kb on - strand, within MPMX26_01248at 1320.506 kb on - strand, within MPMX26_01248at 1320.589 kb on - strand, within MPMX26_01248at 1320.596 kb on - strand, within MPMX26_01248at 1320.606 kb on - strand, within MPMX26_01248at 1320.606 kb on - strand, within MPMX26_01248at 1320.606 kb on - strand, within MPMX26_01248at 1320.606 kb on - strand, within MPMX26_01248at 1320.606 kb on - strand, within MPMX26_01248at 1320.606 kb on - strand, within MPMX26_01248at 1320.612 kb on - strand, within MPMX26_01248at 1320.613 kb on - strand, within MPMX26_01248at 1320.613 kb on - strand, within MPMX26_01248at 1320.627 kb on - strand, within MPMX26_01248at 1320.627 kb on - strand, within MPMX26_01248at 1320.627 kb on - strand, within MPMX26_01248at 1320.627 kb on - strand, within MPMX26_01248at 1320.651 kb on - strandat 1320.656 kb on - strandat 1320.659 kb on - strandat 1320.659 kb on - strandat 1320.659 kb on - strandat 1320.659 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.669 kb on - strandat 1320.672 kb on - strandat 1320.685 kb on - strandat 1320.698 kb on - strandat 1320.708 kb on - strandat 1320.708 kb on - strandat 1320.708 kb on - strandat 1320.708 kb on - strandat 1320.708 kb on - strandat 1320.708 kb on - strandat 1320.708 kb on - strandat 1320.708 kb on - strandat 1320.712 kb on - strandat 1320.729 kb on - strandat 1320.740 kb on - strandat 1320.740 kb on - strandat 1321.093 kb on + strandat 1321.093 kb on + strandat 1321.150 kb on + strand, within MPMX26_01249at 1321.152 kb on + strand, within MPMX26_01249at 1321.225 kb on + strand, within MPMX26_01249at 1321.245 kb on + strand, within MPMX26_01249at 1321.273 kb on + strand, within MPMX26_01249at 1321.273 kb on + strand, within MPMX26_01249at 1321.368 kb on + strand, within MPMX26_01249at 1321.409 kb on + strand, within MPMX26_01249at 1321.417 kb on + strand, within MPMX26_01249at 1321.435 kb on + strand, within MPMX26_01249at 1321.495 kb on + strand, within MPMX26_01249at 1321.495 kb on + strand, within MPMX26_01249at 1321.519 kb on + strand, within MPMX26_01249at 1321.614 kb on + strand, within MPMX26_01249at 1321.677 kb on + strand, within MPMX26_01249at 1321.689 kb on + strand, within MPMX26_01249at 1321.803 kb on + strand, within MPMX26_01249at 1321.803 kb on + strand, within MPMX26_01249at 1321.830 kb on + strand, within MPMX26_01249at 1322.335 kb on + strand, within MPMX26_01250at 1322.889 kb on + strand, within MPMX26_01250

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,320,036 - MPMX26_01248 0.43 -1.1
1,320,036 - MPMX26_01248 0.43 -0.2
1,320,036 - MPMX26_01248 0.43 -0.0
1,320,036 - MPMX26_01248 0.43 -0.1
1,320,036 - MPMX26_01248 0.43 -0.0
1,320,036 - MPMX26_01248 0.43 -0.5
1,320,036 - MPMX26_01248 0.43 -0.3
1,320,036 - MPMX26_01248 0.43 -0.3
1,320,036 - MPMX26_01248 0.43 -0.7
1,320,036 - MPMX26_01248 0.43 -2.6
1,320,036 - MPMX26_01248 0.43 +0.6
1,320,036 - MPMX26_01248 0.43 -0.9
1,320,041 - MPMX26_01248 0.43 +0.2
1,320,041 - MPMX26_01248 0.43 -0.4
1,320,056 - MPMX26_01248 0.45 -0.6
1,320,056 - MPMX26_01248 0.45 -0.7
1,320,056 - MPMX26_01248 0.45 -3.2
1,320,056 - MPMX26_01248 0.45 -0.9
1,320,056 - MPMX26_01248 0.45 -2.6
1,320,056 - MPMX26_01248 0.45 -1.3
1,320,056 - MPMX26_01248 0.45 -2.0
1,320,056 - MPMX26_01248 0.45 -0.4
1,320,061 - MPMX26_01248 0.45 -0.5
1,320,066 - MPMX26_01248 0.45 -0.5
1,320,066 - MPMX26_01248 0.45 -0.4
1,320,200 - MPMX26_01248 0.56 +0.4
1,320,307 - MPMX26_01248 0.64 +0.6
1,320,345 - MPMX26_01248 0.67 -0.6
1,320,355 - MPMX26_01248 0.68 -0.6
1,320,362 - MPMX26_01248 0.69 -0.0
1,320,426 - MPMX26_01248 0.74 -0.2
1,320,426 - MPMX26_01248 0.74 -0.0
1,320,455 - MPMX26_01248 0.76 -0.3
1,320,473 - MPMX26_01248 0.77 -0.5
1,320,506 - MPMX26_01248 0.80 -0.5
1,320,589 - MPMX26_01248 0.86 +0.8
1,320,596 - MPMX26_01248 0.87 -1.1
1,320,606 - MPMX26_01248 0.88 -0.9
1,320,606 - MPMX26_01248 0.88 +0.5
1,320,606 - MPMX26_01248 0.88 -0.6
1,320,606 - MPMX26_01248 0.88 -0.4
1,320,606 - MPMX26_01248 0.88 -0.8
1,320,606 - MPMX26_01248 0.88 -0.4
1,320,612 - MPMX26_01248 0.88 -1.4
1,320,613 - MPMX26_01248 0.88 -0.1
1,320,613 - MPMX26_01248 0.88 -1.5
1,320,627 - MPMX26_01248 0.89 -0.7
1,320,627 - MPMX26_01248 0.89 -0.3
1,320,627 - MPMX26_01248 0.89 +0.7
1,320,627 - MPMX26_01248 0.89 +1.3
1,320,651 - -1.6
1,320,656 - -1.2
1,320,659 - -0.1
1,320,659 - -0.6
1,320,659 - -0.7
1,320,659 - +0.3
1,320,669 - -1.2
1,320,669 - -0.6
1,320,669 - -0.2
1,320,669 - -0.4
1,320,669 - -0.0
1,320,669 - -0.9
1,320,669 - -0.2
1,320,669 - -0.2
1,320,669 - -1.2
1,320,669 - -0.8
1,320,669 - -0.5
1,320,669 - -0.1
1,320,669 - +0.4
1,320,669 - -0.3
1,320,669 - -0.6
1,320,669 - +0.7
1,320,669 - +0.1
1,320,669 - -0.3
1,320,669 - -0.5
1,320,672 - -0.2
1,320,685 - -0.9
1,320,698 - +0.4
1,320,708 - -2.4
1,320,708 - -0.4
1,320,708 - -0.2
1,320,708 - -0.5
1,320,708 - -2.4
1,320,708 - -0.0
1,320,708 - -0.3
1,320,708 - -0.9
1,320,712 - -1.4
1,320,729 - +0.3
1,320,740 - -0.8
1,320,740 - -0.9
1,321,093 + -1.1
1,321,093 + +0.2
1,321,150 + MPMX26_01249 0.14 -1.0
1,321,152 + MPMX26_01249 0.14 -2.4
1,321,225 + MPMX26_01249 0.22 -0.1
1,321,245 + MPMX26_01249 0.24 -0.7
1,321,273 + MPMX26_01249 0.27 +0.3
1,321,273 + MPMX26_01249 0.27 -1.1
1,321,368 + MPMX26_01249 0.37 -0.1
1,321,409 + MPMX26_01249 0.41 +1.0
1,321,417 + MPMX26_01249 0.42 -0.9
1,321,435 + MPMX26_01249 0.44 -0.7
1,321,495 + MPMX26_01249 0.50 -0.4
1,321,495 + MPMX26_01249 0.50 -0.8
1,321,519 + MPMX26_01249 0.53 -0.2
1,321,614 + MPMX26_01249 0.63 -0.8
1,321,677 + MPMX26_01249 0.70 +0.3
1,321,689 + MPMX26_01249 0.71 +1.2
1,321,803 + MPMX26_01249 0.83 +1.6
1,321,803 + MPMX26_01249 0.83 -0.6
1,321,830 + MPMX26_01249 0.86 +0.3
1,322,335 + MPMX26_01250 0.28 +0.6
1,322,889 + MPMX26_01250 0.77 -0.4

Or see this region's nucleotide sequence