Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01163

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01162 and MPMX26_01163 are separated by 292 nucleotidesMPMX26_01163 and MPMX26_01164 are separated by 630 nucleotides MPMX26_01162: MPMX26_01162 - Cytochrome bo(3) ubiquinol oxidase subunit 2, at 1,228,523 to 1,229,590 _01162 MPMX26_01163: MPMX26_01163 - hypothetical protein, at 1,229,883 to 1,230,650 _01163 MPMX26_01164: MPMX26_01164 - hypothetical protein, at 1,231,281 to 1,231,769 _01164 Position (kb) 1229 1230 1231Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1228.884 kb on - strand, within MPMX26_01162at 1228.955 kb on + strand, within MPMX26_01162at 1228.963 kb on - strand, within MPMX26_01162at 1228.970 kb on - strand, within MPMX26_01162at 1229.043 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.159 kb on + strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.204 kb on + strand, within MPMX26_01162at 1229.236 kb on + strand, within MPMX26_01162at 1229.250 kb on + strand, within MPMX26_01162at 1229.251 kb on + strand, within MPMX26_01162at 1229.251 kb on + strand, within MPMX26_01162at 1229.259 kb on - strand, within MPMX26_01162at 1229.285 kb on + strand, within MPMX26_01162at 1229.324 kb on - strand, within MPMX26_01162at 1229.358 kb on + strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.405 kb on + strand, within MPMX26_01162at 1229.482 kb on - strand, within MPMX26_01162at 1229.543 kb on - strandat 1229.556 kb on + strandat 1229.569 kb on - strandat 1229.569 kb on - strandat 1229.711 kb on - strandat 1229.746 kb on - strandat 1230.069 kb on - strand, within MPMX26_01163at 1230.069 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.113 kb on - strand, within MPMX26_01163at 1230.123 kb on - strand, within MPMX26_01163at 1230.123 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.131 kb on - strand, within MPMX26_01163at 1230.141 kb on - strand, within MPMX26_01163at 1230.326 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.465 kb on - strand, within MPMX26_01163at 1230.465 kb on - strand, within MPMX26_01163at 1230.473 kb on - strand, within MPMX26_01163at 1230.536 kb on - strand, within MPMX26_01163at 1230.543 kb on - strand, within MPMX26_01163at 1230.554 kb on - strand, within MPMX26_01163at 1230.554 kb on - strand, within MPMX26_01163at 1230.590 kb on - strandat 1230.609 kb on - strandat 1230.612 kb on - strandat 1230.612 kb on - strandat 1230.612 kb on - strandat 1230.612 kb on - strandat 1230.614 kb on - strandat 1230.614 kb on - strandat 1230.614 kb on - strandat 1231.277 kb on - strandat 1231.277 kb on - strandat 1231.286 kb on - strandat 1231.368 kb on - strand, within MPMX26_01164at 1231.376 kb on - strand, within MPMX26_01164at 1231.403 kb on - strand, within MPMX26_01164at 1231.403 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.466 kb on - strand, within MPMX26_01164at 1231.501 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.598 kb on - strand, within MPMX26_01164at 1231.598 kb on - strand, within MPMX26_01164at 1231.614 kb on - strand, within MPMX26_01164at 1231.642 kb on - strand, within MPMX26_01164at 1231.642 kb on - strand, within MPMX26_01164

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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1,228,884 - MPMX26_01162 0.34 +0.8
1,228,955 + MPMX26_01162 0.40 -0.0
1,228,963 - MPMX26_01162 0.41 +2.8
1,228,970 - MPMX26_01162 0.42 +0.4
1,229,043 + MPMX26_01162 0.49 +0.4
1,229,048 + MPMX26_01162 0.49 +0.8
1,229,048 + MPMX26_01162 0.49 +1.2
1,229,048 + MPMX26_01162 0.49 +1.2
1,229,048 + MPMX26_01162 0.49 +0.8
1,229,056 - MPMX26_01162 0.50 +0.8
1,229,056 - MPMX26_01162 0.50 +0.8
1,229,056 - MPMX26_01162 0.50 +0.4
1,229,056 - MPMX26_01162 0.50 +0.4
1,229,056 - MPMX26_01162 0.50 +0.8
1,229,159 + MPMX26_01162 0.60 -0.2
1,229,192 - MPMX26_01162 0.63 +0.4
1,229,192 - MPMX26_01162 0.63 +0.8
1,229,192 - MPMX26_01162 0.63 +1.2
1,229,204 + MPMX26_01162 0.64 +1.2
1,229,236 + MPMX26_01162 0.67 +2.8
1,229,250 + MPMX26_01162 0.68 +0.2
1,229,251 + MPMX26_01162 0.68 -2.2
1,229,251 + MPMX26_01162 0.68 +0.4
1,229,259 - MPMX26_01162 0.69 +1.8
1,229,285 + MPMX26_01162 0.71 +1.2
1,229,324 - MPMX26_01162 0.75 +1.2
1,229,358 + MPMX26_01162 0.78 +0.8
1,229,366 - MPMX26_01162 0.79 +0.4
1,229,366 - MPMX26_01162 0.79 +0.2
1,229,366 - MPMX26_01162 0.79 -0.7
1,229,366 - MPMX26_01162 0.79 +0.8
1,229,366 - MPMX26_01162 0.79 +0.4
1,229,405 + MPMX26_01162 0.83 +0.2
1,229,482 - MPMX26_01162 0.90 +0.4
1,229,543 - +0.2
1,229,556 + +0.8
1,229,569 - +1.8
1,229,569 - -0.0
1,229,711 - +1.2
1,229,746 - +0.4
1,230,069 - MPMX26_01163 0.24 +0.5
1,230,069 - MPMX26_01163 0.24 +0.1
1,230,113 - MPMX26_01163 0.30 -0.4
1,230,113 - MPMX26_01163 0.30 +0.5
1,230,113 - MPMX26_01163 0.30 +1.2
1,230,113 - MPMX26_01163 0.30 +0.5
1,230,113 - MPMX26_01163 0.30 +0.2
1,230,123 - MPMX26_01163 0.31 +0.4
1,230,123 - MPMX26_01163 0.31 +0.3
1,230,131 - MPMX26_01163 0.32 +0.5
1,230,131 - MPMX26_01163 0.32 +0.6
1,230,131 - MPMX26_01163 0.32 -0.4
1,230,131 - MPMX26_01163 0.32 +0.1
1,230,131 - MPMX26_01163 0.32 +0.1
1,230,141 - MPMX26_01163 0.34 +0.1
1,230,326 - MPMX26_01163 0.58 +0.6
1,230,327 - MPMX26_01163 0.58 -0.5
1,230,327 - MPMX26_01163 0.58 +0.9
1,230,327 - MPMX26_01163 0.58 +0.2
1,230,327 - MPMX26_01163 0.58 -0.4
1,230,327 - MPMX26_01163 0.58 +0.2
1,230,465 - MPMX26_01163 0.76 +0.7
1,230,465 - MPMX26_01163 0.76 +0.2
1,230,473 - MPMX26_01163 0.77 +1.2
1,230,536 - MPMX26_01163 0.85 +0.2
1,230,543 - MPMX26_01163 0.86 -0.5
1,230,554 - MPMX26_01163 0.87 +0.3
1,230,554 - MPMX26_01163 0.87 +0.2
1,230,590 - +0.4
1,230,609 - -0.0
1,230,612 - +0.7
1,230,612 - +0.7
1,230,612 - +0.7
1,230,612 - +0.4
1,230,614 - +0.5
1,230,614 - +0.2
1,230,614 - -0.0
1,231,277 - +0.1
1,231,277 - +0.6
1,231,286 - +2.1
1,231,368 - MPMX26_01164 0.18 -0.0
1,231,376 - MPMX26_01164 0.19 -0.1
1,231,403 - MPMX26_01164 0.25 -0.8
1,231,403 - MPMX26_01164 0.25 +0.2
1,231,456 - MPMX26_01164 0.36 -0.2
1,231,456 - MPMX26_01164 0.36 +0.4
1,231,456 - MPMX26_01164 0.36 +0.4
1,231,466 - MPMX26_01164 0.38 -0.9
1,231,501 - MPMX26_01164 0.45 -0.1
1,231,511 - MPMX26_01164 0.47 +0.1
1,231,511 - MPMX26_01164 0.47 +0.6
1,231,511 - MPMX26_01164 0.47 -0.5
1,231,511 - MPMX26_01164 0.47 -0.0
1,231,527 - MPMX26_01164 0.50 -0.4
1,231,527 - MPMX26_01164 0.50 -0.2
1,231,527 - MPMX26_01164 0.50 -0.5
1,231,527 - MPMX26_01164 0.50 +0.2
1,231,527 - MPMX26_01164 0.50 +0.1
1,231,598 - MPMX26_01164 0.65 +0.2
1,231,598 - MPMX26_01164 0.65 -0.2
1,231,614 - MPMX26_01164 0.68 -0.2
1,231,642 - MPMX26_01164 0.74 +0.1
1,231,642 - MPMX26_01164 0.74 -0.6

Or see this region's nucleotide sequence