Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01162 and MPMX26_01163 are separated by 292 nucleotides MPMX26_01163 and MPMX26_01164 are separated by 630 nucleotides
MPMX26_01162: MPMX26_01162 - Cytochrome bo(3) ubiquinol oxidase subunit 2, at 1,228,523 to 1,229,590
_01162
MPMX26_01163: MPMX26_01163 - hypothetical protein, at 1,229,883 to 1,230,650
_01163
MPMX26_01164: MPMX26_01164 - hypothetical protein, at 1,231,281 to 1,231,769
_01164
Position (kb)
1229
1230
1231 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1228.884 kb on - strand, within MPMX26_01162 at 1228.955 kb on + strand, within MPMX26_01162 at 1228.963 kb on - strand, within MPMX26_01162 at 1228.970 kb on - strand, within MPMX26_01162 at 1229.043 kb on + strand, within MPMX26_01162 at 1229.048 kb on + strand, within MPMX26_01162 at 1229.048 kb on + strand, within MPMX26_01162 at 1229.048 kb on + strand, within MPMX26_01162 at 1229.048 kb on + strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.056 kb on - strand, within MPMX26_01162 at 1229.159 kb on + strand, within MPMX26_01162 at 1229.192 kb on - strand, within MPMX26_01162 at 1229.192 kb on - strand, within MPMX26_01162 at 1229.192 kb on - strand, within MPMX26_01162 at 1229.204 kb on + strand, within MPMX26_01162 at 1229.236 kb on + strand, within MPMX26_01162 at 1229.250 kb on + strand, within MPMX26_01162 at 1229.251 kb on + strand, within MPMX26_01162 at 1229.251 kb on + strand, within MPMX26_01162 at 1229.259 kb on - strand, within MPMX26_01162 at 1229.285 kb on + strand, within MPMX26_01162 at 1229.324 kb on - strand, within MPMX26_01162 at 1229.358 kb on + strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.366 kb on - strand, within MPMX26_01162 at 1229.405 kb on + strand, within MPMX26_01162 at 1229.482 kb on - strand, within MPMX26_01162 at 1229.543 kb on - strand at 1229.556 kb on + strand at 1229.569 kb on - strand at 1229.569 kb on - strand at 1229.711 kb on - strand at 1229.746 kb on - strand at 1230.069 kb on - strand, within MPMX26_01163 at 1230.069 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.113 kb on - strand, within MPMX26_01163 at 1230.123 kb on - strand, within MPMX26_01163 at 1230.123 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.131 kb on - strand, within MPMX26_01163 at 1230.141 kb on - strand, within MPMX26_01163 at 1230.326 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.327 kb on - strand, within MPMX26_01163 at 1230.465 kb on - strand, within MPMX26_01163 at 1230.465 kb on - strand, within MPMX26_01163 at 1230.473 kb on - strand, within MPMX26_01163 at 1230.536 kb on - strand, within MPMX26_01163 at 1230.543 kb on - strand, within MPMX26_01163 at 1230.554 kb on - strand, within MPMX26_01163 at 1230.554 kb on - strand, within MPMX26_01163 at 1230.590 kb on - strand at 1230.609 kb on - strand at 1230.612 kb on - strand at 1230.612 kb on - strand at 1230.612 kb on - strand at 1230.612 kb on - strand at 1230.614 kb on - strand at 1230.614 kb on - strand at 1230.614 kb on - strand at 1231.277 kb on - strand at 1231.277 kb on - strand at 1231.286 kb on - strand at 1231.368 kb on - strand, within MPMX26_01164 at 1231.376 kb on - strand, within MPMX26_01164 at 1231.403 kb on - strand, within MPMX26_01164 at 1231.403 kb on - strand, within MPMX26_01164 at 1231.456 kb on - strand, within MPMX26_01164 at 1231.456 kb on - strand, within MPMX26_01164 at 1231.456 kb on - strand, within MPMX26_01164 at 1231.466 kb on - strand, within MPMX26_01164 at 1231.501 kb on - strand, within MPMX26_01164 at 1231.511 kb on - strand, within MPMX26_01164 at 1231.511 kb on - strand, within MPMX26_01164 at 1231.511 kb on - strand, within MPMX26_01164 at 1231.511 kb on - strand, within MPMX26_01164 at 1231.527 kb on - strand, within MPMX26_01164 at 1231.527 kb on - strand, within MPMX26_01164 at 1231.527 kb on - strand, within MPMX26_01164 at 1231.527 kb on - strand, within MPMX26_01164 at 1231.527 kb on - strand, within MPMX26_01164 at 1231.598 kb on - strand, within MPMX26_01164 at 1231.598 kb on - strand, within MPMX26_01164 at 1231.614 kb on - strand, within MPMX26_01164 at 1231.642 kb on - strand, within MPMX26_01164 at 1231.642 kb on - strand, within MPMX26_01164
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 1,228,884 - MPMX26_01162 0.34 +0.8 1,228,955 + MPMX26_01162 0.40 -0.0 1,228,963 - MPMX26_01162 0.41 +2.8 1,228,970 - MPMX26_01162 0.42 +0.4 1,229,043 + MPMX26_01162 0.49 +0.4 1,229,048 + MPMX26_01162 0.49 +0.8 1,229,048 + MPMX26_01162 0.49 +1.2 1,229,048 + MPMX26_01162 0.49 +1.2 1,229,048 + MPMX26_01162 0.49 +0.8 1,229,056 - MPMX26_01162 0.50 +0.8 1,229,056 - MPMX26_01162 0.50 +0.8 1,229,056 - MPMX26_01162 0.50 +0.4 1,229,056 - MPMX26_01162 0.50 +0.4 1,229,056 - MPMX26_01162 0.50 +0.8 1,229,159 + MPMX26_01162 0.60 -0.2 1,229,192 - MPMX26_01162 0.63 +0.4 1,229,192 - MPMX26_01162 0.63 +0.8 1,229,192 - MPMX26_01162 0.63 +1.2 1,229,204 + MPMX26_01162 0.64 +1.2 1,229,236 + MPMX26_01162 0.67 +2.8 1,229,250 + MPMX26_01162 0.68 +0.2 1,229,251 + MPMX26_01162 0.68 -2.2 1,229,251 + MPMX26_01162 0.68 +0.4 1,229,259 - MPMX26_01162 0.69 +1.8 1,229,285 + MPMX26_01162 0.71 +1.2 1,229,324 - MPMX26_01162 0.75 +1.2 1,229,358 + MPMX26_01162 0.78 +0.8 1,229,366 - MPMX26_01162 0.79 +0.4 1,229,366 - MPMX26_01162 0.79 +0.2 1,229,366 - MPMX26_01162 0.79 -0.7 1,229,366 - MPMX26_01162 0.79 +0.8 1,229,366 - MPMX26_01162 0.79 +0.4 1,229,405 + MPMX26_01162 0.83 +0.2 1,229,482 - MPMX26_01162 0.90 +0.4 1,229,543 - +0.2 1,229,556 + +0.8 1,229,569 - +1.8 1,229,569 - -0.0 1,229,711 - +1.2 1,229,746 - +0.4 1,230,069 - MPMX26_01163 0.24 +0.5 1,230,069 - MPMX26_01163 0.24 +0.1 1,230,113 - MPMX26_01163 0.30 -0.4 1,230,113 - MPMX26_01163 0.30 +0.5 1,230,113 - MPMX26_01163 0.30 +1.2 1,230,113 - MPMX26_01163 0.30 +0.5 1,230,113 - MPMX26_01163 0.30 +0.2 1,230,123 - MPMX26_01163 0.31 +0.4 1,230,123 - MPMX26_01163 0.31 +0.3 1,230,131 - MPMX26_01163 0.32 +0.5 1,230,131 - MPMX26_01163 0.32 +0.6 1,230,131 - MPMX26_01163 0.32 -0.4 1,230,131 - MPMX26_01163 0.32 +0.1 1,230,131 - MPMX26_01163 0.32 +0.1 1,230,141 - MPMX26_01163 0.34 +0.1 1,230,326 - MPMX26_01163 0.58 +0.6 1,230,327 - MPMX26_01163 0.58 -0.5 1,230,327 - MPMX26_01163 0.58 +0.9 1,230,327 - MPMX26_01163 0.58 +0.2 1,230,327 - MPMX26_01163 0.58 -0.4 1,230,327 - MPMX26_01163 0.58 +0.2 1,230,465 - MPMX26_01163 0.76 +0.7 1,230,465 - MPMX26_01163 0.76 +0.2 1,230,473 - MPMX26_01163 0.77 +1.2 1,230,536 - MPMX26_01163 0.85 +0.2 1,230,543 - MPMX26_01163 0.86 -0.5 1,230,554 - MPMX26_01163 0.87 +0.3 1,230,554 - MPMX26_01163 0.87 +0.2 1,230,590 - +0.4 1,230,609 - -0.0 1,230,612 - +0.7 1,230,612 - +0.7 1,230,612 - +0.7 1,230,612 - +0.4 1,230,614 - +0.5 1,230,614 - +0.2 1,230,614 - -0.0 1,231,277 - +0.1 1,231,277 - +0.6 1,231,286 - +2.1 1,231,368 - MPMX26_01164 0.18 -0.0 1,231,376 - MPMX26_01164 0.19 -0.1 1,231,403 - MPMX26_01164 0.25 -0.8 1,231,403 - MPMX26_01164 0.25 +0.2 1,231,456 - MPMX26_01164 0.36 -0.2 1,231,456 - MPMX26_01164 0.36 +0.4 1,231,456 - MPMX26_01164 0.36 +0.4 1,231,466 - MPMX26_01164 0.38 -0.9 1,231,501 - MPMX26_01164 0.45 -0.1 1,231,511 - MPMX26_01164 0.47 +0.1 1,231,511 - MPMX26_01164 0.47 +0.6 1,231,511 - MPMX26_01164 0.47 -0.5 1,231,511 - MPMX26_01164 0.47 -0.0 1,231,527 - MPMX26_01164 0.50 -0.4 1,231,527 - MPMX26_01164 0.50 -0.2 1,231,527 - MPMX26_01164 0.50 -0.5 1,231,527 - MPMX26_01164 0.50 +0.2 1,231,527 - MPMX26_01164 0.50 +0.1 1,231,598 - MPMX26_01164 0.65 +0.2 1,231,598 - MPMX26_01164 0.65 -0.2 1,231,614 - MPMX26_01164 0.68 -0.2 1,231,642 - MPMX26_01164 0.74 +0.1 1,231,642 - MPMX26_01164 0.74 -0.6
Or see this region's nucleotide sequence