Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01017 and MPMX26_01018 are separated by 119 nucleotides MPMX26_01018 and MPMX26_01019 are separated by 108 nucleotides MPMX26_01019 and MPMX26_01020 are separated by 67 nucleotides
MPMX26_01017: MPMX26_01017 - hypothetical protein, at 1,075,925 to 1,076,989
_01017
MPMX26_01018: MPMX26_01018 - hypothetical protein, at 1,077,109 to 1,077,504
_01018
MPMX26_01019: MPMX26_01019 - hypothetical protein, at 1,077,613 to 1,078,245
_01019
MPMX26_01020: MPMX26_01020 - hypothetical protein, at 1,078,313 to 1,079,794
_01020
Position (kb)
1077
1078 Strain fitness (log2 ratio)
-2
-1
0
1 at 1076.283 kb on + strand, within MPMX26_01017 at 1076.568 kb on - strand, within MPMX26_01017 at 1077.148 kb on - strand at 1077.186 kb on - strand, within MPMX26_01018 at 1077.253 kb on - strand, within MPMX26_01018 at 1077.253 kb on - strand, within MPMX26_01018 at 1077.253 kb on - strand, within MPMX26_01018 at 1077.293 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.352 kb on - strand, within MPMX26_01018 at 1077.357 kb on - strand, within MPMX26_01018 at 1077.357 kb on - strand, within MPMX26_01018 at 1077.371 kb on - strand, within MPMX26_01018 at 1077.396 kb on - strand, within MPMX26_01018 at 1077.425 kb on - strand, within MPMX26_01018 at 1077.460 kb on - strand, within MPMX26_01018 at 1077.485 kb on - strand at 1077.610 kb on + strand at 1077.612 kb on + strand at 1077.717 kb on + strand, within MPMX26_01019 at 1077.767 kb on + strand, within MPMX26_01019 at 1077.767 kb on + strand, within MPMX26_01019 at 1077.792 kb on + strand, within MPMX26_01019 at 1077.877 kb on + strand, within MPMX26_01019 at 1077.912 kb on + strand, within MPMX26_01019 at 1077.912 kb on + strand, within MPMX26_01019 at 1077.921 kb on + strand, within MPMX26_01019 at 1077.938 kb on + strand, within MPMX26_01019 at 1077.960 kb on + strand, within MPMX26_01019 at 1077.960 kb on + strand, within MPMX26_01019 at 1077.967 kb on + strand, within MPMX26_01019 at 1077.973 kb on + strand, within MPMX26_01019 at 1078.013 kb on + strand, within MPMX26_01019 at 1078.013 kb on + strand, within MPMX26_01019 at 1078.013 kb on + strand, within MPMX26_01019 at 1078.077 kb on + strand, within MPMX26_01019 at 1078.081 kb on + strand, within MPMX26_01019 at 1078.081 kb on + strand, within MPMX26_01019 at 1078.117 kb on + strand, within MPMX26_01019 at 1078.124 kb on + strand, within MPMX26_01019 at 1078.124 kb on + strand, within MPMX26_01019 at 1078.124 kb on + strand, within MPMX26_01019 at 1078.146 kb on + strand, within MPMX26_01019 at 1078.176 kb on + strand, within MPMX26_01019 at 1078.181 kb on + strand, within MPMX26_01019 at 1078.185 kb on + strand at 1078.185 kb on + strand at 1078.185 kb on + strand at 1078.185 kb on + strand at 1078.325 kb on + strand at 1078.325 kb on - strand at 1078.333 kb on - strand at 1078.333 kb on - strand at 1078.333 kb on - strand at 1078.333 kb on - strand at 1078.333 kb on - strand at 1078.335 kb on + strand at 1078.343 kb on - strand at 1078.343 kb on - strand at 1078.360 kb on - strand at 1078.370 kb on - strand at 1078.370 kb on - strand at 1078.390 kb on - strand at 1078.396 kb on - strand at 1078.396 kb on - strand at 1078.397 kb on - strand at 1078.397 kb on - strand at 1078.417 kb on - strand at 1078.471 kb on - strand, within MPMX26_01020 at 1078.493 kb on - strand, within MPMX26_01020 at 1078.498 kb on - strand, within MPMX26_01020
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 1,076,283 + MPMX26_01017 0.34 -0.8 1,076,568 - MPMX26_01017 0.60 -0.1 1,077,148 - -1.0 1,077,186 - MPMX26_01018 0.19 -2.1 1,077,253 - MPMX26_01018 0.36 -0.8 1,077,253 - MPMX26_01018 0.36 -0.7 1,077,253 - MPMX26_01018 0.36 -0.9 1,077,293 - MPMX26_01018 0.46 -2.2 1,077,352 - MPMX26_01018 0.61 -1.5 1,077,352 - MPMX26_01018 0.61 -0.3 1,077,352 - MPMX26_01018 0.61 +1.7 1,077,352 - MPMX26_01018 0.61 -1.6 1,077,352 - MPMX26_01018 0.61 -0.8 1,077,352 - MPMX26_01018 0.61 -0.6 1,077,352 - MPMX26_01018 0.61 -1.0 1,077,352 - MPMX26_01018 0.61 -1.2 1,077,352 - MPMX26_01018 0.61 -0.6 1,077,352 - MPMX26_01018 0.61 +0.4 1,077,357 - MPMX26_01018 0.63 -0.5 1,077,357 - MPMX26_01018 0.63 -0.6 1,077,371 - MPMX26_01018 0.66 -1.1 1,077,396 - MPMX26_01018 0.72 -0.4 1,077,425 - MPMX26_01018 0.80 -0.1 1,077,460 - MPMX26_01018 0.89 -1.1 1,077,485 - -0.3 1,077,610 + -0.5 1,077,612 + +0.6 1,077,717 + MPMX26_01019 0.16 -1.1 1,077,767 + MPMX26_01019 0.24 +0.9 1,077,767 + MPMX26_01019 0.24 -0.6 1,077,792 + MPMX26_01019 0.28 +0.5 1,077,877 + MPMX26_01019 0.42 -0.5 1,077,912 + MPMX26_01019 0.47 -0.3 1,077,912 + MPMX26_01019 0.47 -0.8 1,077,921 + MPMX26_01019 0.49 -0.9 1,077,938 + MPMX26_01019 0.51 -0.2 1,077,960 + MPMX26_01019 0.55 -0.5 1,077,960 + MPMX26_01019 0.55 -0.6 1,077,967 + MPMX26_01019 0.56 -0.9 1,077,973 + MPMX26_01019 0.57 -0.1 1,078,013 + MPMX26_01019 0.63 -0.5 1,078,013 + MPMX26_01019 0.63 -0.6 1,078,013 + MPMX26_01019 0.63 -2.4 1,078,077 + MPMX26_01019 0.73 -0.4 1,078,081 + MPMX26_01019 0.74 -1.6 1,078,081 + MPMX26_01019 0.74 +0.1 1,078,117 + MPMX26_01019 0.80 -0.2 1,078,124 + MPMX26_01019 0.81 -0.6 1,078,124 + MPMX26_01019 0.81 -0.0 1,078,124 + MPMX26_01019 0.81 -0.8 1,078,146 + MPMX26_01019 0.84 -0.7 1,078,176 + MPMX26_01019 0.89 -0.3 1,078,181 + MPMX26_01019 0.90 -1.2 1,078,185 + -0.4 1,078,185 + -0.6 1,078,185 + -0.4 1,078,185 + -0.3 1,078,325 + +0.0 1,078,325 - -0.4 1,078,333 - -1.0 1,078,333 - +0.2 1,078,333 - -0.0 1,078,333 - -0.8 1,078,333 - +0.1 1,078,335 + -0.8 1,078,343 - -0.4 1,078,343 - -0.1 1,078,360 - -0.2 1,078,370 - -1.0 1,078,370 - -1.4 1,078,390 - -0.6 1,078,396 - -0.1 1,078,396 - +1.3 1,078,397 - +0.4 1,078,397 - -1.3 1,078,417 - +0.7 1,078,471 - MPMX26_01020 0.11 -0.3 1,078,493 - MPMX26_01020 0.12 +0.3 1,078,498 - MPMX26_01020 0.12 +0.0
Or see this region's nucleotide sequence