Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00727 and MPMX26_00728 are separated by 27 nucleotides MPMX26_00728 and MPMX26_00729 are separated by 1 nucleotides MPMX26_00729 and MPMX26_00730 are separated by 25 nucleotides MPMX26_00730 and MPMX26_00731 are separated by 6 nucleotides
MPMX26_00727: MPMX26_00727 - tRNA-Gln, at 766,438 to 766,512
_00727
MPMX26_00728: MPMX26_00728 - tRNA-Gln, at 766,540 to 766,614
_00728
MPMX26_00729: MPMX26_00729 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 766,616 to 767,446
_00729
MPMX26_00730: MPMX26_00730 - Outer-membrane lipoprotein LolB, at 767,472 to 768,047
_00730
MPMX26_00731: MPMX26_00731 - Beta-barrel assembly-enhancing protease, at 768,054 to 769,736
_00731
Position (kb) 767
768
769 Strain fitness (log2 ratio) -1
0
1 at 767.450 kb on + strand at 767.458 kb on - strand at 767.460 kb on + strand at 767.468 kb on - strand at 767.669 kb on - strand, within MPMX26_00730 at 767.669 kb on - strand, within MPMX26_00730 at 767.669 kb on - strand, within MPMX26_00730 at 767.712 kb on - strand, within MPMX26_00730 at 767.753 kb on - strand, within MPMX26_00730 at 767.979 kb on - strand, within MPMX26_00730 at 767.979 kb on - strand, within MPMX26_00730 at 768.021 kb on - strand at 768.052 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 767,450 + +0.2 767,458 - -0.6 767,460 + +0.1 767,468 - +1.5 767,669 - MPMX26_00730 0.34 -0.3 767,669 - MPMX26_00730 0.34 +0.1 767,669 - MPMX26_00730 0.34 +0.1 767,712 - MPMX26_00730 0.42 -0.9 767,753 - MPMX26_00730 0.49 -0.8 767,979 - MPMX26_00730 0.88 +0.3 767,979 - MPMX26_00730 0.88 -0.2 768,021 - -0.0 768,052 - +1.5
Or see this region's nucleotide sequence