Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00460

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00459 and MPMX26_00460 are separated by 102 nucleotidesMPMX26_00460 and MPMX26_00461 are separated by 51 nucleotidesMPMX26_00461 and MPMX26_00462 are separated by 164 nucleotides MPMX26_00459: MPMX26_00459 - putative TonB-dependent receptor, at 492,419 to 494,518 _00459 MPMX26_00460: MPMX26_00460 - hypothetical protein, at 494,621 to 496,084 _00460 MPMX26_00461: MPMX26_00461 - hypothetical protein, at 496,136 to 496,582 _00461 MPMX26_00462: MPMX26_00462 - hypothetical protein, at 496,747 to 497,178 _00462 Position (kb) 494 495 496 497Strain fitness (log2 ratio) -2 -1 0 1 2at 493.642 kb on + strand, within MPMX26_00459at 493.642 kb on + strand, within MPMX26_00459at 493.676 kb on + strand, within MPMX26_00459at 493.682 kb on + strand, within MPMX26_00459at 493.687 kb on + strand, within MPMX26_00459at 493.694 kb on + strand, within MPMX26_00459at 493.844 kb on + strand, within MPMX26_00459at 493.844 kb on + strand, within MPMX26_00459at 493.844 kb on + strand, within MPMX26_00459at 493.855 kb on + strand, within MPMX26_00459at 493.859 kb on + strand, within MPMX26_00459at 493.868 kb on + strand, within MPMX26_00459at 493.874 kb on + strand, within MPMX26_00459at 494.009 kb on + strand, within MPMX26_00459at 494.009 kb on + strand, within MPMX26_00459at 494.011 kb on + strand, within MPMX26_00459at 494.075 kb on + strand, within MPMX26_00459at 494.185 kb on + strand, within MPMX26_00459at 494.197 kb on + strand, within MPMX26_00459at 494.197 kb on + strand, within MPMX26_00459at 494.199 kb on + strand, within MPMX26_00459at 494.225 kb on + strand, within MPMX26_00459at 494.225 kb on + strand, within MPMX26_00459at 494.225 kb on + strand, within MPMX26_00459at 494.225 kb on + strand, within MPMX26_00459at 494.225 kb on + strand, within MPMX26_00459at 494.225 kb on + strand, within MPMX26_00459at 494.251 kb on + strand, within MPMX26_00459at 494.281 kb on + strand, within MPMX26_00459at 494.281 kb on + strand, within MPMX26_00459at 494.287 kb on + strand, within MPMX26_00459at 494.317 kb on + strandat 494.336 kb on + strandat 494.336 kb on + strandat 494.362 kb on + strandat 494.362 kb on + strandat 494.362 kb on + strandat 494.362 kb on + strandat 494.428 kb on + strandat 494.438 kb on + strandat 494.438 kb on + strandat 494.451 kb on + strandat 494.653 kb on + strandat 494.653 kb on + strandat 494.699 kb on + strandat 494.753 kb on + strandat 494.938 kb on + strand, within MPMX26_00460at 494.945 kb on + strand, within MPMX26_00460at 494.981 kb on + strand, within MPMX26_00460at 495.088 kb on + strand, within MPMX26_00460at 495.098 kb on + strand, within MPMX26_00460at 495.099 kb on + strand, within MPMX26_00460at 495.121 kb on + strand, within MPMX26_00460at 495.146 kb on + strand, within MPMX26_00460at 495.190 kb on + strand, within MPMX26_00460at 495.190 kb on + strand, within MPMX26_00460at 495.331 kb on + strand, within MPMX26_00460at 495.368 kb on + strand, within MPMX26_00460at 495.385 kb on + strand, within MPMX26_00460at 495.385 kb on + strand, within MPMX26_00460at 495.385 kb on + strand, within MPMX26_00460at 495.385 kb on + strand, within MPMX26_00460at 495.415 kb on + strand, within MPMX26_00460at 495.415 kb on + strand, within MPMX26_00460at 495.445 kb on + strand, within MPMX26_00460at 495.445 kb on + strand, within MPMX26_00460at 495.445 kb on + strand, within MPMX26_00460at 495.463 kb on + strand, within MPMX26_00460at 495.481 kb on + strand, within MPMX26_00460at 495.481 kb on + strand, within MPMX26_00460at 495.508 kb on + strand, within MPMX26_00460at 495.508 kb on + strand, within MPMX26_00460at 495.545 kb on + strand, within MPMX26_00460at 495.571 kb on + strand, within MPMX26_00460at 495.587 kb on + strand, within MPMX26_00460at 495.598 kb on + strand, within MPMX26_00460at 495.716 kb on + strand, within MPMX26_00460at 495.751 kb on + strand, within MPMX26_00460at 495.761 kb on + strand, within MPMX26_00460at 495.761 kb on + strand, within MPMX26_00460at 495.772 kb on + strand, within MPMX26_00460at 495.772 kb on + strand, within MPMX26_00460at 495.772 kb on + strand, within MPMX26_00460at 495.811 kb on + strand, within MPMX26_00460at 495.964 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 495.988 kb on + strandat 496.067 kb on + strandat 496.067 kb on + strandat 496.097 kb on + strandat 496.206 kb on - strand, within MPMX26_00461at 496.211 kb on - strand, within MPMX26_00461at 496.260 kb on - strand, within MPMX26_00461at 496.270 kb on - strand, within MPMX26_00461at 496.330 kb on - strand, within MPMX26_00461at 496.330 kb on - strand, within MPMX26_00461at 496.330 kb on - strand, within MPMX26_00461at 496.330 kb on - strand, within MPMX26_00461at 496.330 kb on - strand, within MPMX26_00461at 496.330 kb on - strand, within MPMX26_00461at 496.330 kb on - strand, within MPMX26_00461at 496.348 kb on - strand, within MPMX26_00461at 496.354 kb on - strand, within MPMX26_00461at 496.355 kb on - strand, within MPMX26_00461at 496.370 kb on - strand, within MPMX26_00461at 496.370 kb on - strand, within MPMX26_00461at 496.370 kb on - strand, within MPMX26_00461at 496.389 kb on - strand, within MPMX26_00461at 496.428 kb on - strand, within MPMX26_00461at 496.458 kb on - strand, within MPMX26_00461at 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.866 kb on + strand, within MPMX26_00462at 496.884 kb on + strand, within MPMX26_00462at 496.924 kb on + strand, within MPMX26_00462at 496.978 kb on + strand, within MPMX26_00462at 497.069 kb on - strand, within MPMX26_00462

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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493,642 + MPMX26_00459 0.58 +1.0
493,642 + MPMX26_00459 0.58 -0.0
493,676 + MPMX26_00459 0.60 +1.1
493,682 + MPMX26_00459 0.60 -0.5
493,687 + MPMX26_00459 0.60 -0.4
493,694 + MPMX26_00459 0.61 -1.5
493,844 + MPMX26_00459 0.68 -1.0
493,844 + MPMX26_00459 0.68 +1.0
493,844 + MPMX26_00459 0.68 +0.5
493,855 + MPMX26_00459 0.68 -1.9
493,859 + MPMX26_00459 0.69 -1.4
493,868 + MPMX26_00459 0.69 +0.9
493,874 + MPMX26_00459 0.69 +0.2
494,009 + MPMX26_00459 0.76 -1.3
494,009 + MPMX26_00459 0.76 +0.0
494,011 + MPMX26_00459 0.76 +0.3
494,075 + MPMX26_00459 0.79 +0.5
494,185 + MPMX26_00459 0.84 +0.9
494,197 + MPMX26_00459 0.85 +0.2
494,197 + MPMX26_00459 0.85 -0.5
494,199 + MPMX26_00459 0.85 +0.4
494,225 + MPMX26_00459 0.86 +0.5
494,225 + MPMX26_00459 0.86 -0.6
494,225 + MPMX26_00459 0.86 +0.2
494,225 + MPMX26_00459 0.86 +0.3
494,225 + MPMX26_00459 0.86 -0.0
494,225 + MPMX26_00459 0.86 +0.5
494,251 + MPMX26_00459 0.87 -0.3
494,281 + MPMX26_00459 0.89 +0.3
494,281 + MPMX26_00459 0.89 -0.5
494,287 + MPMX26_00459 0.89 -0.1
494,317 + +0.1
494,336 + -0.5
494,336 + +0.3
494,362 + -0.1
494,362 + -0.4
494,362 + -1.3
494,362 + +0.8
494,428 + +0.0
494,438 + -0.1
494,438 + -0.2
494,451 + +0.5
494,653 + -0.3
494,653 + -0.4
494,699 + +0.7
494,753 + +0.6
494,938 + MPMX26_00460 0.22 +1.0
494,945 + MPMX26_00460 0.22 +0.0
494,981 + MPMX26_00460 0.25 -0.4
495,088 + MPMX26_00460 0.32 +0.4
495,098 + MPMX26_00460 0.33 -0.1
495,099 + MPMX26_00460 0.33 +1.1
495,121 + MPMX26_00460 0.34 +1.2
495,146 + MPMX26_00460 0.36 +0.3
495,190 + MPMX26_00460 0.39 +0.7
495,190 + MPMX26_00460 0.39 -0.2
495,331 + MPMX26_00460 0.48 +0.7
495,368 + MPMX26_00460 0.51 +0.9
495,385 + MPMX26_00460 0.52 +0.3
495,385 + MPMX26_00460 0.52 +0.6
495,385 + MPMX26_00460 0.52 -0.6
495,385 + MPMX26_00460 0.52 +0.1
495,415 + MPMX26_00460 0.54 -0.1
495,415 + MPMX26_00460 0.54 +0.5
495,445 + MPMX26_00460 0.56 +0.4
495,445 + MPMX26_00460 0.56 +0.0
495,445 + MPMX26_00460 0.56 +0.9
495,463 + MPMX26_00460 0.58 -0.4
495,481 + MPMX26_00460 0.59 +0.7
495,481 + MPMX26_00460 0.59 -0.3
495,508 + MPMX26_00460 0.61 -1.0
495,508 + MPMX26_00460 0.61 +2.4
495,545 + MPMX26_00460 0.63 +0.5
495,571 + MPMX26_00460 0.65 +0.7
495,587 + MPMX26_00460 0.66 +0.0
495,598 + MPMX26_00460 0.67 +0.8
495,716 + MPMX26_00460 0.75 +0.0
495,751 + MPMX26_00460 0.77 +0.4
495,761 + MPMX26_00460 0.78 +0.2
495,761 + MPMX26_00460 0.78 +0.5
495,772 + MPMX26_00460 0.79 -0.2
495,772 + MPMX26_00460 0.79 +0.7
495,772 + MPMX26_00460 0.79 +0.4
495,811 + MPMX26_00460 0.81 -1.1
495,964 + -0.2
495,988 + +0.9
495,988 + -1.4
495,988 + +0.2
495,988 + -0.1
495,988 + +0.1
495,988 + -0.2
495,988 + -0.1
495,988 + +0.4
495,988 + -1.0
495,988 + -1.3
495,988 + +1.1
495,988 + +0.1
495,988 + +0.4
496,067 + +0.4
496,067 + -0.5
496,097 + -0.0
496,206 - MPMX26_00461 0.16 -0.8
496,211 - MPMX26_00461 0.17 +0.4
496,260 - MPMX26_00461 0.28 -0.7
496,270 - MPMX26_00461 0.30 -0.4
496,330 - MPMX26_00461 0.43 -0.2
496,330 - MPMX26_00461 0.43 -0.3
496,330 - MPMX26_00461 0.43 -0.7
496,330 - MPMX26_00461 0.43 +1.6
496,330 - MPMX26_00461 0.43 +0.3
496,330 - MPMX26_00461 0.43 -0.3
496,330 - MPMX26_00461 0.43 +0.0
496,348 - MPMX26_00461 0.47 +0.2
496,354 - MPMX26_00461 0.49 +0.1
496,355 - MPMX26_00461 0.49 -0.6
496,370 - MPMX26_00461 0.52 -0.4
496,370 - MPMX26_00461 0.52 +0.4
496,370 - MPMX26_00461 0.52 +0.6
496,389 - MPMX26_00461 0.57 +0.1
496,428 - MPMX26_00461 0.65 +0.8
496,458 - MPMX26_00461 0.72 -2.0
496,538 - +0.1
496,538 - -0.7
496,538 - -0.8
496,538 - +0.0
496,538 - -0.3
496,538 - -0.0
496,538 - -0.2
496,866 + MPMX26_00462 0.28 +0.8
496,884 + MPMX26_00462 0.32 -0.3
496,924 + MPMX26_00462 0.41 +1.8
496,978 + MPMX26_00462 0.53 -1.3
497,069 - MPMX26_00462 0.75 +0.7

Or see this region's nucleotide sequence