Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00379 and MPMX26_00380 are separated by 19 nucleotides MPMX26_00380 and MPMX26_00381 overlap by 1 nucleotides MPMX26_00381 and MPMX26_00382 are separated by 53 nucleotides
MPMX26_00379: MPMX26_00379 - hypothetical protein, at 410,395 to 411,195
_00379
MPMX26_00380: MPMX26_00380 - Biopolymer transport protein ExbB, at 411,215 to 411,841
_00380
MPMX26_00381: MPMX26_00381 - Biopolymer transport protein ExbD, at 411,841 to 412,245
_00381
MPMX26_00382: MPMX26_00382 - Peptide methionine sulfoxide reductase MsrA, at 412,299 to 412,823
_00382
Position (kb) 411
412 Strain fitness (log2 ratio) -2
-1
0
1
2 at 410.322 kb on + strand at 410.322 kb on + strand at 410.336 kb on + strand at 410.336 kb on + strand at 410.357 kb on + strand at 410.357 kb on + strand at 410.363 kb on + strand at 410.380 kb on + strand at 410.412 kb on + strand at 410.426 kb on + strand at 410.427 kb on + strand at 411.751 kb on + strand, within MPMX26_00380 at 411.761 kb on + strand, within MPMX26_00380 at 411.784 kb on + strand at 411.784 kb on + strand at 411.804 kb on + strand at 411.804 kb on + strand at 412.376 kb on - strand, within MPMX26_00382 at 412.454 kb on - strand, within MPMX26_00382 at 412.469 kb on - strand, within MPMX26_00382 at 412.469 kb on - strand, within MPMX26_00382 at 412.469 kb on - strand, within MPMX26_00382 at 412.469 kb on - strand, within MPMX26_00382 at 412.470 kb on - strand, within MPMX26_00382 at 412.475 kb on - strand, within MPMX26_00382 at 412.476 kb on - strand, within MPMX26_00382 at 412.482 kb on - strand, within MPMX26_00382 at 412.482 kb on - strand, within MPMX26_00382 at 412.504 kb on - strand, within MPMX26_00382 at 412.548 kb on - strand, within MPMX26_00382 at 412.548 kb on - strand, within MPMX26_00382 at 412.548 kb on - strand, within MPMX26_00382 at 412.550 kb on - strand, within MPMX26_00382 at 412.555 kb on - strand, within MPMX26_00382 at 412.560 kb on - strand, within MPMX26_00382 at 412.574 kb on - strand, within MPMX26_00382 at 412.583 kb on - strand, within MPMX26_00382 at 412.583 kb on - strand, within MPMX26_00382 at 412.583 kb on - strand, within MPMX26_00382 at 412.583 kb on - strand, within MPMX26_00382 at 412.635 kb on - strand, within MPMX26_00382 at 412.640 kb on - strand, within MPMX26_00382 at 412.656 kb on - strand, within MPMX26_00382 at 412.734 kb on - strand, within MPMX26_00382 at 412.764 kb on - strand, within MPMX26_00382 at 412.764 kb on - strand, within MPMX26_00382 at 412.764 kb on - strand, within MPMX26_00382 at 412.764 kb on - strand, within MPMX26_00382 at 412.764 kb on - strand, within MPMX26_00382 at 412.764 kb on - strand, within MPMX26_00382 at 412.794 kb on - strand at 412.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 410,322 + -1.7 410,322 + +0.9 410,336 + -0.9 410,336 + -0.0 410,357 + +1.0 410,357 + +0.2 410,363 + +2.5 410,380 + -1.0 410,412 + +0.1 410,426 + -0.0 410,427 + -0.9 411,751 + MPMX26_00380 0.85 +0.4 411,761 + MPMX26_00380 0.87 -2.1 411,784 + +0.7 411,784 + +0.2 411,804 + +1.3 411,804 + -0.2 412,376 - MPMX26_00382 0.15 -1.0 412,454 - MPMX26_00382 0.30 -0.6 412,469 - MPMX26_00382 0.32 -1.0 412,469 - MPMX26_00382 0.32 +0.2 412,469 - MPMX26_00382 0.32 -0.5 412,469 - MPMX26_00382 0.32 -0.5 412,470 - MPMX26_00382 0.33 -0.5 412,475 - MPMX26_00382 0.34 -0.0 412,476 - MPMX26_00382 0.34 -0.6 412,482 - MPMX26_00382 0.35 -1.2 412,482 - MPMX26_00382 0.35 -0.6 412,504 - MPMX26_00382 0.39 -1.0 412,548 - MPMX26_00382 0.47 +0.4 412,548 - MPMX26_00382 0.47 -0.6 412,548 - MPMX26_00382 0.47 -0.6 412,550 - MPMX26_00382 0.48 -0.6 412,555 - MPMX26_00382 0.49 -0.2 412,560 - MPMX26_00382 0.50 -2.2 412,574 - MPMX26_00382 0.52 -0.8 412,583 - MPMX26_00382 0.54 +0.6 412,583 - MPMX26_00382 0.54 +0.3 412,583 - MPMX26_00382 0.54 -1.9 412,583 - MPMX26_00382 0.54 +0.2 412,635 - MPMX26_00382 0.64 -0.3 412,640 - MPMX26_00382 0.65 -1.0 412,656 - MPMX26_00382 0.68 -0.9 412,734 - MPMX26_00382 0.83 -1.2 412,764 - MPMX26_00382 0.89 +1.4 412,764 - MPMX26_00382 0.89 -1.2 412,764 - MPMX26_00382 0.89 -0.2 412,764 - MPMX26_00382 0.89 -0.6 412,764 - MPMX26_00382 0.89 -0.2 412,764 - MPMX26_00382 0.89 +0.1 412,794 - -0.4 412,823 - -0.0
Or see this region's nucleotide sequence