Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00349

Experiment: L-tyrosine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00348 and MPMX26_00349 are separated by 61 nucleotidesMPMX26_00349 and MPMX26_00350 are separated by 200 nucleotidesMPMX26_00350 and MPMX26_00351 are separated by 230 nucleotides MPMX26_00348: MPMX26_00348 - 3-isopropylmalate dehydrogenase, at 377,807 to 378,886 _00348 MPMX26_00349: MPMX26_00349 - hypothetical protein, at 378,948 to 379,349 _00349 MPMX26_00350: MPMX26_00350 - Translation initiation factor IF-1, at 379,550 to 379,771 _00350 MPMX26_00351: MPMX26_00351 - putative HTH-type transcriptional regulator, at 380,002 to 381,009 _00351 Position (kb) 378 379 380Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 377.959 kb on + strand, within MPMX26_00348at 377.960 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.965 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 377.970 kb on + strand, within MPMX26_00348at 378.016 kb on + strand, within MPMX26_00348at 378.016 kb on + strand, within MPMX26_00348at 378.021 kb on + strand, within MPMX26_00348at 378.032 kb on + strand, within MPMX26_00348at 378.043 kb on + strand, within MPMX26_00348at 378.057 kb on + strand, within MPMX26_00348at 378.061 kb on + strand, within MPMX26_00348at 378.066 kb on + strand, within MPMX26_00348at 378.083 kb on + strand, within MPMX26_00348at 378.185 kb on + strand, within MPMX26_00348at 378.185 kb on + strand, within MPMX26_00348at 378.185 kb on + strand, within MPMX26_00348at 378.203 kb on + strand, within MPMX26_00348at 378.272 kb on + strand, within MPMX26_00348at 378.277 kb on + strand, within MPMX26_00348at 378.280 kb on + strand, within MPMX26_00348at 378.288 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.290 kb on + strand, within MPMX26_00348at 378.342 kb on + strand, within MPMX26_00348at 378.347 kb on + strand, within MPMX26_00348at 378.350 kb on - strand, within MPMX26_00348at 378.359 kb on + strand, within MPMX26_00348at 378.377 kb on + strand, within MPMX26_00348at 378.398 kb on + strand, within MPMX26_00348at 378.418 kb on + strand, within MPMX26_00348at 378.418 kb on + strand, within MPMX26_00348at 378.418 kb on + strand, within MPMX26_00348at 378.428 kb on + strand, within MPMX26_00348at 378.454 kb on + strand, within MPMX26_00348at 378.454 kb on + strand, within MPMX26_00348at 378.454 kb on + strand, within MPMX26_00348at 378.488 kb on + strand, within MPMX26_00348at 378.496 kb on + strand, within MPMX26_00348at 378.496 kb on + strand, within MPMX26_00348at 378.496 kb on + strand, within MPMX26_00348at 378.507 kb on + strand, within MPMX26_00348at 378.549 kb on + strand, within MPMX26_00348at 378.570 kb on + strand, within MPMX26_00348at 378.575 kb on + strand, within MPMX26_00348at 378.625 kb on + strand, within MPMX26_00348at 378.625 kb on + strand, within MPMX26_00348at 378.625 kb on + strand, within MPMX26_00348at 378.637 kb on + strand, within MPMX26_00348at 378.637 kb on + strand, within MPMX26_00348at 378.654 kb on + strand, within MPMX26_00348at 378.659 kb on + strand, within MPMX26_00348at 378.692 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.727 kb on + strand, within MPMX26_00348at 378.774 kb on + strand, within MPMX26_00348at 378.785 kb on + strandat 378.785 kb on + strandat 378.785 kb on + strandat 378.785 kb on + strandat 378.797 kb on + strandat 378.797 kb on + strandat 378.797 kb on + strandat 378.807 kb on + strandat 378.807 kb on + strandat 378.866 kb on + strandat 378.869 kb on + strandat 379.079 kb on - strand, within MPMX26_00349at 379.223 kb on - strand, within MPMX26_00349at 379.228 kb on - strand, within MPMX26_00349at 379.228 kb on - strand, within MPMX26_00349at 379.526 kb on - strandat 379.555 kb on - strandat 379.555 kb on - strandat 379.555 kb on - strandat 379.995 kb on + strandat 379.995 kb on + strandat 380.019 kb on + strandat 380.065 kb on + strandat 380.065 kb on + strandat 380.109 kb on + strand, within MPMX26_00351at 380.130 kb on + strand, within MPMX26_00351at 380.130 kb on + strand, within MPMX26_00351at 380.137 kb on + strand, within MPMX26_00351at 380.137 kb on + strand, within MPMX26_00351at 380.137 kb on + strand, within MPMX26_00351at 380.137 kb on + strand, within MPMX26_00351at 380.194 kb on + strand, within MPMX26_00351at 380.218 kb on + strand, within MPMX26_00351at 380.218 kb on + strand, within MPMX26_00351at 380.284 kb on + strand, within MPMX26_00351at 380.284 kb on + strand, within MPMX26_00351at 380.284 kb on + strand, within MPMX26_00351at 380.284 kb on + strand, within MPMX26_00351at 380.284 kb on + strand, within MPMX26_00351at 380.295 kb on + strand, within MPMX26_00351at 380.311 kb on + strand, within MPMX26_00351at 380.319 kb on + strand, within MPMX26_00351

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
remove
377,959 + MPMX26_00348 0.14 -3.9
377,960 + MPMX26_00348 0.14 -3.1
377,965 + MPMX26_00348 0.15 -2.8
377,965 + MPMX26_00348 0.15 -3.5
377,965 + MPMX26_00348 0.15 -4.0
377,965 + MPMX26_00348 0.15 -3.6
377,965 + MPMX26_00348 0.15 -0.9
377,965 + MPMX26_00348 0.15 -3.8
377,965 + MPMX26_00348 0.15 -4.5
377,970 + MPMX26_00348 0.15 -2.0
377,970 + MPMX26_00348 0.15 -4.0
377,970 + MPMX26_00348 0.15 -4.0
377,970 + MPMX26_00348 0.15 -3.9
377,970 + MPMX26_00348 0.15 -3.9
377,970 + MPMX26_00348 0.15 -2.3
377,970 + MPMX26_00348 0.15 +0.2
377,970 + MPMX26_00348 0.15 -3.8
378,016 + MPMX26_00348 0.19 -0.3
378,016 + MPMX26_00348 0.19 -3.3
378,021 + MPMX26_00348 0.20 -3.9
378,032 + MPMX26_00348 0.21 -2.0
378,043 + MPMX26_00348 0.22 -4.2
378,057 + MPMX26_00348 0.23 -3.7
378,061 + MPMX26_00348 0.24 -4.5
378,066 + MPMX26_00348 0.24 -2.1
378,083 + MPMX26_00348 0.26 -3.7
378,185 + MPMX26_00348 0.35 -3.4
378,185 + MPMX26_00348 0.35 -3.7
378,185 + MPMX26_00348 0.35 -4.2
378,203 + MPMX26_00348 0.37 -4.8
378,272 + MPMX26_00348 0.43 -3.4
378,277 + MPMX26_00348 0.44 -2.9
378,280 + MPMX26_00348 0.44 -4.4
378,288 + MPMX26_00348 0.45 -2.8
378,290 + MPMX26_00348 0.45 -3.4
378,290 + MPMX26_00348 0.45 -1.4
378,290 + MPMX26_00348 0.45 -3.8
378,290 + MPMX26_00348 0.45 -4.4
378,290 + MPMX26_00348 0.45 -2.3
378,290 + MPMX26_00348 0.45 -4.3
378,290 + MPMX26_00348 0.45 -2.2
378,290 + MPMX26_00348 0.45 -3.6
378,290 + MPMX26_00348 0.45 -3.6
378,290 + MPMX26_00348 0.45 -3.3
378,290 + MPMX26_00348 0.45 -1.5
378,290 + MPMX26_00348 0.45 -3.5
378,290 + MPMX26_00348 0.45 -3.9
378,290 + MPMX26_00348 0.45 -3.4
378,290 + MPMX26_00348 0.45 -4.0
378,290 + MPMX26_00348 0.45 -3.2
378,342 + MPMX26_00348 0.50 -2.7
378,347 + MPMX26_00348 0.50 -3.2
378,350 - MPMX26_00348 0.50 -3.5
378,359 + MPMX26_00348 0.51 -3.7
378,377 + MPMX26_00348 0.53 -3.6
378,398 + MPMX26_00348 0.55 -5.1
378,418 + MPMX26_00348 0.57 -4.7
378,418 + MPMX26_00348 0.57 +0.5
378,418 + MPMX26_00348 0.57 -2.7
378,428 + MPMX26_00348 0.57 -2.5
378,454 + MPMX26_00348 0.60 -3.8
378,454 + MPMX26_00348 0.60 -3.6
378,454 + MPMX26_00348 0.60 -4.4
378,488 + MPMX26_00348 0.63 -4.5
378,496 + MPMX26_00348 0.64 -3.6
378,496 + MPMX26_00348 0.64 -0.6
378,496 + MPMX26_00348 0.64 -3.7
378,507 + MPMX26_00348 0.65 -5.1
378,549 + MPMX26_00348 0.69 -4.1
378,570 + MPMX26_00348 0.71 -4.4
378,575 + MPMX26_00348 0.71 -4.0
378,625 + MPMX26_00348 0.76 -5.6
378,625 + MPMX26_00348 0.76 -0.3
378,625 + MPMX26_00348 0.76 -3.4
378,637 + MPMX26_00348 0.77 -1.8
378,637 + MPMX26_00348 0.77 -4.9
378,654 + MPMX26_00348 0.78 -2.7
378,659 + MPMX26_00348 0.79 -4.2
378,692 + MPMX26_00348 0.82 -1.9
378,727 + MPMX26_00348 0.85 -3.9
378,727 + MPMX26_00348 0.85 -4.3
378,727 + MPMX26_00348 0.85 -4.0
378,727 + MPMX26_00348 0.85 -2.5
378,727 + MPMX26_00348 0.85 -4.2
378,727 + MPMX26_00348 0.85 -3.1
378,727 + MPMX26_00348 0.85 -2.7
378,727 + MPMX26_00348 0.85 -4.3
378,727 + MPMX26_00348 0.85 -5.3
378,774 + MPMX26_00348 0.90 -3.1
378,785 + -3.8
378,785 + -3.9
378,785 + -3.2
378,785 + -4.5
378,797 + -2.6
378,797 + -3.1
378,797 + -4.6
378,807 + -3.0
378,807 + -2.8
378,866 + -2.6
378,869 + -5.0
379,079 - MPMX26_00349 0.33 -0.3
379,223 - MPMX26_00349 0.68 +3.0
379,228 - MPMX26_00349 0.70 +1.7
379,228 - MPMX26_00349 0.70 +0.7
379,526 - -0.9
379,555 - +0.2
379,555 - -0.1
379,555 - -0.2
379,995 + -1.3
379,995 + +0.4
380,019 + -0.7
380,065 + -0.6
380,065 + -1.0
380,109 + MPMX26_00351 0.11 -0.3
380,130 + MPMX26_00351 0.13 -0.3
380,130 + MPMX26_00351 0.13 -0.0
380,137 + MPMX26_00351 0.13 -0.4
380,137 + MPMX26_00351 0.13 -0.4
380,137 + MPMX26_00351 0.13 -1.0
380,137 + MPMX26_00351 0.13 -0.4
380,194 + MPMX26_00351 0.19 -0.1
380,218 + MPMX26_00351 0.21 +0.1
380,218 + MPMX26_00351 0.21 -0.6
380,284 + MPMX26_00351 0.28 -0.0
380,284 + MPMX26_00351 0.28 -1.0
380,284 + MPMX26_00351 0.28 -0.6
380,284 + MPMX26_00351 0.28 +0.4
380,284 + MPMX26_00351 0.28 -0.6
380,295 + MPMX26_00351 0.29 -0.7
380,311 + MPMX26_00351 0.31 -0.3
380,319 + MPMX26_00351 0.31 -0.5

Or see this region's nucleotide sequence