Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00172

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00171 and MPMX26_00172 are separated by 19 nucleotidesMPMX26_00172 and MPMX26_00173 are separated by 165 nucleotides MPMX26_00171: MPMX26_00171 - Fe(2+) transporter FeoB, at 184,906 to 186,759 _00171 MPMX26_00172: MPMX26_00172 - hypothetical protein, at 186,779 to 187,036 _00172 MPMX26_00173: MPMX26_00173 - UDP-N-acetylmuramoylalanine--D-glutamate ligase, at 187,202 to 188,548 _00173 Position (kb) 186 187 188Strain fitness (log2 ratio) -2 -1 0 1at 185.934 kb on + strand, within MPMX26_00171at 186.721 kb on + strandat 186.721 kb on + strandat 186.782 kb on + strandat 186.961 kb on + strand, within MPMX26_00172at 186.976 kb on + strand, within MPMX26_00172at 186.976 kb on + strand, within MPMX26_00172at 187.012 kb on + strandat 187.012 kb on + strandat 187.012 kb on + strandat 187.012 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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185,934 + MPMX26_00171 0.55 -1.3
186,721 + -0.1
186,721 + -1.6
186,782 + +0.0
186,961 + MPMX26_00172 0.71 -0.6
186,976 + MPMX26_00172 0.76 -1.1
186,976 + MPMX26_00172 0.76 -1.9
187,012 + -1.0
187,012 + -0.7
187,012 + -0.2
187,012 + -1.6

Or see this region's nucleotide sequence