Strain Fitness in Escherichia coli ECRC101 around MCAODC_25245

Experiment: Bas14

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas14
1,771,109	+	mdfA	MCAODC_25240	0.48	+0.9
1,771,109	+	mdfA	MCAODC_25240	0.48	+0.3
1,771,110	-	mdfA	MCAODC_25240	0.48	+0.8
1,771,110	-	mdfA	MCAODC_25240	0.48	+0.9
1,771,110	-	mdfA	MCAODC_25240	0.48	+0.0
1,771,110	-	mdfA	MCAODC_25240	0.48	-1.3
1,771,110	-	mdfA	MCAODC_25240	0.48	+0.0
1,771,111	+	mdfA	MCAODC_25240	0.48	+1.3
1,771,112	-	mdfA	MCAODC_25240	0.49	-1.7
1,771,112	-	mdfA	MCAODC_25240	0.49	-0.2
1,771,112	-	mdfA	MCAODC_25240	0.49	-0.4
1,771,112	-	mdfA	MCAODC_25240	0.49	+1.1
1,771,151	+	mdfA	MCAODC_25240	0.52	+0.3
1,771,282	-	mdfA	MCAODC_25240	0.62	-2.4
1,771,329	-	mdfA	MCAODC_25240	0.66	-0.6
1,771,329	-	mdfA	MCAODC_25240	0.66	+0.4
1,771,396	-	mdfA	MCAODC_25240	0.72	-0.4
1,771,396	-	mdfA	MCAODC_25240	0.72	-0.1
1,771,450	-	mdfA	MCAODC_25240	0.76	-1.1
1,771,511	+	mdfA	MCAODC_25240	0.81	+1.9
1,771,512	-	mdfA	MCAODC_25240	0.81	-0.2
1,771,543	-	mdfA	MCAODC_25240	0.84	-1.3
1,771,565	-	mdfA	MCAODC_25240	0.85	+0.3
1,771,581	-	mdfA	MCAODC_25240	0.87	+0.5
1,771,581	-	mdfA	MCAODC_25240	0.87	-0.3
1,771,607	-	mdfA	MCAODC_25240	0.89	+0.1
1,771,657	+				+0.1
1,771,657	+				+0.9
1,771,657	+				-0.1
1,771,658	-				+1.7
1,771,658	-				+0.8
1,771,658	-				+0.1
1,771,783	+				-0.9
1,771,848	+				+1.5
1,771,858	-				-1.3
1,771,858	-				+0.9
1,771,859	+				+0.9
1,771,859	+				-1.1
1,771,859	+				+2.7
1,771,860	-				-0.6
1,771,860	-				+0.9
1,771,860	-				-1.6
1,771,863	+				+1.6
1,771,864	-				+0.9
1,771,864	-				-0.3
1,771,890	+				-1.4
1,771,890	+				-1.4
1,771,891	-				+0.6
1,771,891	-				+1.9
1,771,936	+				-1.4
1,771,937	-				-0.1
1,771,962	-				-1.3
1,771,974	-				-2.0
1,772,007	+				-0.1
1,772,055	+				-0.4
1,772,055	+				-0.2
1,772,065	+				-1.0
1,772,180	-	ybjG	MCAODC_25245	0.25	-2.7
1,772,180	-	ybjG	MCAODC_25245	0.25	+0.9
1,772,290	+	ybjG	MCAODC_25245	0.44	-0.8
1,772,297	+	ybjG	MCAODC_25245	0.45	-1.8
1,772,300	-	ybjG	MCAODC_25245	0.45	+3.5
1,772,347	+	ybjG	MCAODC_25245	0.53	-0.2
1,772,450	+	ybjG	MCAODC_25245	0.70	-0.4
1,772,451	-	ybjG	MCAODC_25245	0.71	-0.1
1,772,451	-	ybjG	MCAODC_25245	0.71	+0.9
1,772,500	+	ybjG	MCAODC_25245	0.79	+0.2
1,772,500	+	ybjG	MCAODC_25245	0.79	-1.6
1,772,501	-	ybjG	MCAODC_25245	0.79	-0.4
1,772,516	-	ybjG	MCAODC_25245	0.81	+1.9
1,772,527	+	ybjG	MCAODC_25245	0.83	-0.8
1,772,555	+	ybjG	MCAODC_25245	0.88	-0.1
1,772,555	+	ybjG	MCAODC_25245	0.88	-2.1
1,772,643	+				-1.6
1,772,646	+				+1.3
1,772,666	+				+0.6
1,772,670	+				+0.4
1,772,748	+				-1.1
1,772,748	+				-0.3
1,772,846	+	deoR	MCAODC_25250	0.21	-1.1
1,772,846	+	deoR	MCAODC_25250	0.21	-0.8
1,772,847	-	deoR	MCAODC_25250	0.21	-0.9
1,772,848	+	deoR	MCAODC_25250	0.22	-1.1
1,772,848	+	deoR	MCAODC_25250	0.22	-0.9
1,772,849	-	deoR	MCAODC_25250	0.22	-0.1
1,772,887	-	deoR	MCAODC_25250	0.27	+1.5
1,772,952	+	deoR	MCAODC_25250	0.35	+1.3
1,772,952	+	deoR	MCAODC_25250	0.35	-0.1
1,772,953	-	deoR	MCAODC_25250	0.35	-0.4
1,773,004	+	deoR	MCAODC_25250	0.42	+0.2
1,773,035	-	deoR	MCAODC_25250	0.46	+0.3
1,773,195	-	deoR	MCAODC_25250	0.67	+0.3
1,773,221	-	deoR	MCAODC_25250	0.71	+1.2
1,773,229	+	deoR	MCAODC_25250	0.72	-0.0
1,773,238	+	deoR	MCAODC_25250	0.73	-0.1
1,773,239	-	deoR	MCAODC_25250	0.73	-0.4
1,773,398	+				+0.9
1,773,398	+				-0.3
1,773,398	+				-0.7
1,773,398	+				-1.1
1,773,399	-				+0.6
1,773,427	+				+1.9
1,773,427	+				-0.9
1,773,437	+				-1.8
1,773,438	-				-0.1
1,773,440	+				+1.9
1,773,448	+				-1.6
1,773,449	-				+0.3
1,773,490	+				+0.0