Strain Fitness in Escherichia coli ECRC101 around MCAODC_23140

Experiment: Bas14

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas14
1,366,261	+	mdtG	MCAODC_23135	0.16	+1.2
1,366,376	-	mdtG	MCAODC_23135	0.28	+0.4
1,366,395	+	mdtG	MCAODC_23135	0.30	-2.1
1,366,492	+	mdtG	MCAODC_23135	0.40	+0.0
1,366,580	+	mdtG	MCAODC_23135	0.49	-1.0
1,366,581	-	mdtG	MCAODC_23135	0.49	+0.2
1,366,610	-	mdtG	MCAODC_23135	0.52	+2.2
1,366,766	+	mdtG	MCAODC_23135	0.68	-0.4
1,366,767	-	mdtG	MCAODC_23135	0.68	-1.1
1,366,767	-	mdtG	MCAODC_23135	0.68	+0.0
1,366,767	-	mdtG	MCAODC_23135	0.68	+2.0
1,366,889	-	mdtG	MCAODC_23135	0.81	+1.8
1,366,898	+	mdtG	MCAODC_23135	0.82	+1.8
1,366,899	-	mdtG	MCAODC_23135	0.82	+0.5
1,366,984	-				+0.8
1,367,004	+				-1.5
1,367,040	+				+0.6
1,367,089	+				+1.2
1,367,090	-				-1.0
1,367,113	+				+1.8
1,367,166	+				+0.5
1,367,351	+	msyB	MCAODC_23140	0.52	-1.3
1,367,351	+	msyB	MCAODC_23140	0.52	+0.1
1,367,435	+	msyB	MCAODC_23140	0.74	+1.8
1,367,435	+	msyB	MCAODC_23140	0.74	-0.9
1,367,435	+	msyB	MCAODC_23140	0.74	-1.4
1,367,435	+	msyB	MCAODC_23140	0.74	+0.2
1,367,435	+	msyB	MCAODC_23140	0.74	+1.4
1,367,436	-	msyB	MCAODC_23140	0.74	-0.9
1,367,440	+	msyB	MCAODC_23140	0.75	-0.5
1,367,440	+	msyB	MCAODC_23140	0.75	+1.1
1,367,440	+	msyB	MCAODC_23140	0.75	+0.2
1,367,440	+	msyB	MCAODC_23140	0.75	-1.0
1,367,529	+				+0.8
1,367,530	-				+2.8
1,367,533	+				+0.8
1,367,617	+	yceK	MCAODC_23145	0.37	+1.8
1,367,617	+	yceK	MCAODC_23145	0.37	-0.2
1,367,617	+	yceK	MCAODC_23145	0.37	+1.0
1,367,617	+	yceK	MCAODC_23145	0.37	+1.5
1,367,618	-	yceK	MCAODC_23145	0.38	-0.6
1,367,662	+	yceK	MCAODC_23145	0.57	+1.1
1,367,662	+	yceK	MCAODC_23145	0.57	+4.1
1,367,691	-	yceK	MCAODC_23145	0.70	-0.6
1,367,751	+				+0.8
1,367,991	-				+1.4
1,367,991	-				-0.2
1,367,994	-				+0.2
1,367,994	-				+0.6
1,367,994	-				-1.3
1,368,011	+				-0.2
1,368,012	-				+0.2
1,368,208	-	mdoH	MCAODC_23155	0.11	+0.2
1,368,235	-	mdoH	MCAODC_23155	0.12	-0.7
1,368,235	-	mdoH	MCAODC_23155	0.12	-1.6
1,368,296	-	mdoH	MCAODC_23155	0.14	+1.8
1,368,296	-	mdoH	MCAODC_23155	0.14	-0.2
1,368,482	-	mdoH	MCAODC_23155	0.22	+1.5