Strain Fitness in Escherichia coli ECRC101 around MCAODC_03270
Experiment: Bas14
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bas14 |
---|---|---|---|---|---|
remove | |||||
657,321 | - | -0.1 | |||
657,387 | + | mdtN | MCAODC_03265 | 0.11 | -0.2 |
657,387 | + | mdtN | MCAODC_03265 | 0.11 | +0.8 |
657,388 | - | mdtN | MCAODC_03265 | 0.11 | +0.7 |
657,388 | - | mdtN | MCAODC_03265 | 0.11 | -2.2 |
657,388 | - | mdtN | MCAODC_03265 | 0.11 | -0.5 |
657,388 | - | mdtN | MCAODC_03265 | 0.11 | -0.8 |
657,388 | - | mdtN | MCAODC_03265 | 0.11 | -0.5 |
657,397 | + | mdtN | MCAODC_03265 | 0.12 | -0.5 |
657,397 | + | mdtN | MCAODC_03265 | 0.12 | +1.5 |
657,397 | + | mdtN | MCAODC_03265 | 0.12 | -1.6 |
657,397 | + | mdtN | MCAODC_03265 | 0.12 | -1.3 |
657,397 | + | mdtN | MCAODC_03265 | 0.12 | +0.1 |
657,397 | + | mdtN | MCAODC_03265 | 0.12 | -0.1 |
657,398 | - | mdtN | MCAODC_03265 | 0.12 | -1.7 |
657,398 | - | mdtN | MCAODC_03265 | 0.12 | +1.7 |
657,412 | - | mdtN | MCAODC_03265 | 0.14 | -0.4 |
657,412 | - | mdtN | MCAODC_03265 | 0.14 | +1.1 |
657,449 | + | mdtN | MCAODC_03265 | 0.17 | +0.4 |
657,449 | + | mdtN | MCAODC_03265 | 0.17 | -1.3 |
657,449 | + | mdtN | MCAODC_03265 | 0.17 | -0.3 |
657,450 | - | mdtN | MCAODC_03265 | 0.17 | +0.9 |
657,450 | - | mdtN | MCAODC_03265 | 0.17 | -0.4 |
657,576 | + | mdtN | MCAODC_03265 | 0.30 | +0.1 |
657,576 | + | mdtN | MCAODC_03265 | 0.30 | -1.3 |
657,576 | + | mdtN | MCAODC_03265 | 0.30 | -1.7 |
657,675 | + | mdtN | MCAODC_03265 | 0.39 | -0.0 |
657,675 | + | mdtN | MCAODC_03265 | 0.39 | +0.7 |
657,675 | + | mdtN | MCAODC_03265 | 0.39 | -0.6 |
657,675 | + | mdtN | MCAODC_03265 | 0.39 | -1.6 |
657,675 | + | mdtN | MCAODC_03265 | 0.39 | -0.1 |
657,675 | + | mdtN | MCAODC_03265 | 0.39 | -0.3 |
657,676 | - | mdtN | MCAODC_03265 | 0.39 | -1.8 |
657,676 | - | mdtN | MCAODC_03265 | 0.39 | -0.7 |
657,676 | - | mdtN | MCAODC_03265 | 0.39 | -0.1 |
657,676 | - | mdtN | MCAODC_03265 | 0.39 | -0.7 |
657,680 | + | mdtN | MCAODC_03265 | 0.40 | -0.7 |
657,774 | + | mdtN | MCAODC_03265 | 0.49 | +0.7 |
657,774 | + | mdtN | MCAODC_03265 | 0.49 | -0.2 |
657,774 | + | mdtN | MCAODC_03265 | 0.49 | -1.0 |
657,774 | + | mdtN | MCAODC_03265 | 0.49 | -1.4 |
657,775 | - | mdtN | MCAODC_03265 | 0.49 | +0.1 |
657,775 | - | mdtN | MCAODC_03265 | 0.49 | -1.2 |
657,782 | + | mdtN | MCAODC_03265 | 0.50 | -0.4 |
657,782 | + | mdtN | MCAODC_03265 | 0.50 | -2.3 |
657,833 | + | mdtN | MCAODC_03265 | 0.54 | -1.5 |
657,833 | + | mdtN | MCAODC_03265 | 0.54 | -0.7 |
657,833 | + | mdtN | MCAODC_03265 | 0.54 | -1.3 |
657,834 | - | mdtN | MCAODC_03265 | 0.55 | -2.3 |
657,834 | - | mdtN | MCAODC_03265 | 0.55 | +0.7 |
657,834 | - | mdtN | MCAODC_03265 | 0.55 | +0.1 |
657,982 | - | mdtN | MCAODC_03265 | 0.69 | -0.2 |
657,986 | + | mdtN | MCAODC_03265 | 0.69 | -1.1 |
658,006 | + | mdtN | MCAODC_03265 | 0.71 | +2.1 |
658,056 | + | mdtN | MCAODC_03265 | 0.76 | +0.3 |
658,056 | + | mdtN | MCAODC_03265 | 0.76 | -0.7 |
658,057 | - | mdtN | MCAODC_03265 | 0.76 | +0.5 |
658,188 | + | mdtN | MCAODC_03265 | 0.89 | -1.7 |
658,189 | - | mdtN | MCAODC_03265 | 0.89 | +0.5 |
658,191 | + | mdtN | MCAODC_03265 | 0.89 | +1.2 |
658,191 | + | mdtN | MCAODC_03265 | 0.89 | -0.6 |
658,192 | - | mdtN | MCAODC_03265 | 0.89 | -0.8 |
658,240 | - | -0.9 | |||
658,284 | + | -1.1 | |||
658,367 | - | +1.9 | |||
658,367 | - | -1.0 | |||
658,367 | - | +0.8 | |||
658,415 | - | -0.3 | |||
658,491 | + | +0.7 | |||
658,491 | + | +0.5 | |||
658,515 | + | mdtO | MCAODC_03270 | 0.10 | -1.3 |
658,515 | + | mdtO | MCAODC_03270 | 0.10 | -0.5 |
658,516 | - | mdtO | MCAODC_03270 | 0.10 | +0.3 |
658,585 | - | mdtO | MCAODC_03270 | 0.14 | -0.7 |
658,713 | + | mdtO | MCAODC_03270 | 0.20 | +0.8 |
658,713 | + | mdtO | MCAODC_03270 | 0.20 | -0.0 |
658,714 | - | mdtO | MCAODC_03270 | 0.20 | -0.3 |
658,744 | - | mdtO | MCAODC_03270 | 0.22 | +0.3 |
658,766 | - | mdtO | MCAODC_03270 | 0.23 | -0.5 |
658,778 | + | mdtO | MCAODC_03270 | 0.23 | +0.4 |
658,778 | + | mdtO | MCAODC_03270 | 0.23 | +0.3 |
658,778 | + | mdtO | MCAODC_03270 | 0.23 | -0.5 |
658,779 | - | mdtO | MCAODC_03270 | 0.23 | +0.7 |
658,795 | - | mdtO | MCAODC_03270 | 0.24 | +1.4 |
658,807 | + | mdtO | MCAODC_03270 | 0.25 | -1.7 |
658,808 | - | mdtO | MCAODC_03270 | 0.25 | +2.1 |
658,808 | - | mdtO | MCAODC_03270 | 0.25 | +0.8 |
658,808 | - | mdtO | MCAODC_03270 | 0.25 | +0.7 |
658,825 | + | mdtO | MCAODC_03270 | 0.25 | -0.4 |
658,871 | + | mdtO | MCAODC_03270 | 0.28 | -0.1 |
658,895 | + | mdtO | MCAODC_03270 | 0.29 | -0.1 |
659,049 | + | mdtO | MCAODC_03270 | 0.36 | -1.3 |
659,049 | + | mdtO | MCAODC_03270 | 0.36 | -0.3 |
659,049 | + | mdtO | MCAODC_03270 | 0.36 | -1.3 |
659,049 | + | mdtO | MCAODC_03270 | 0.36 | -1.6 |
659,049 | + | mdtO | MCAODC_03270 | 0.36 | -0.3 |
659,050 | - | mdtO | MCAODC_03270 | 0.36 | +0.7 |
659,055 | + | mdtO | MCAODC_03270 | 0.37 | -1.8 |
659,056 | - | mdtO | MCAODC_03270 | 0.37 | +0.5 |
659,056 | - | mdtO | MCAODC_03270 | 0.37 | +0.5 |
659,108 | + | mdtO | MCAODC_03270 | 0.39 | +0.7 |
659,232 | - | mdtO | MCAODC_03270 | 0.45 | +0.5 |
659,243 | + | mdtO | MCAODC_03270 | 0.46 | +1.5 |
659,244 | - | mdtO | MCAODC_03270 | 0.46 | -1.7 |
659,244 | - | mdtO | MCAODC_03270 | 0.46 | -0.4 |
659,260 | + | mdtO | MCAODC_03270 | 0.47 | +2.1 |
659,260 | + | mdtO | MCAODC_03270 | 0.47 | -0.5 |
659,261 | - | mdtO | MCAODC_03270 | 0.47 | +1.1 |
659,261 | - | mdtO | MCAODC_03270 | 0.47 | -0.8 |
659,337 | - | mdtO | MCAODC_03270 | 0.50 | -0.9 |
659,349 | + | mdtO | MCAODC_03270 | 0.51 | -0.5 |
659,349 | + | mdtO | MCAODC_03270 | 0.51 | +0.8 |
659,349 | + | mdtO | MCAODC_03270 | 0.51 | -0.3 |
659,349 | + | mdtO | MCAODC_03270 | 0.51 | -1.4 |
659,349 | + | mdtO | MCAODC_03270 | 0.51 | +0.6 |
659,350 | - | mdtO | MCAODC_03270 | 0.51 | -1.1 |
659,350 | - | mdtO | MCAODC_03270 | 0.51 | -0.4 |
659,350 | - | mdtO | MCAODC_03270 | 0.51 | +1.5 |
659,350 | - | mdtO | MCAODC_03270 | 0.51 | -1.0 |
659,351 | + | mdtO | MCAODC_03270 | 0.51 | -0.2 |
659,352 | - | mdtO | MCAODC_03270 | 0.51 | -1.7 |
659,352 | - | mdtO | MCAODC_03270 | 0.51 | +0.1 |
659,352 | - | mdtO | MCAODC_03270 | 0.51 | +1.6 |
659,352 | - | mdtO | MCAODC_03270 | 0.51 | -1.7 |
659,352 | - | mdtO | MCAODC_03270 | 0.51 | -1.3 |
659,438 | + | mdtO | MCAODC_03270 | 0.55 | -1.2 |
659,438 | + | mdtO | MCAODC_03270 | 0.55 | +0.1 |
659,439 | - | mdtO | MCAODC_03270 | 0.55 | +0.7 |
659,439 | - | mdtO | MCAODC_03270 | 0.55 | -1.6 |
659,439 | - | mdtO | MCAODC_03270 | 0.55 | +0.6 |
659,463 | - | mdtO | MCAODC_03270 | 0.57 | -0.7 |
659,485 | - | mdtO | MCAODC_03270 | 0.58 | +0.8 |
659,551 | + | mdtO | MCAODC_03270 | 0.61 | -1.4 |
659,576 | + | mdtO | MCAODC_03270 | 0.62 | +0.2 |
659,576 | + | mdtO | MCAODC_03270 | 0.62 | -0.3 |
659,576 | + | mdtO | MCAODC_03270 | 0.62 | -0.5 |
659,577 | - | mdtO | MCAODC_03270 | 0.62 | +0.1 |
659,655 | + | mdtO | MCAODC_03270 | 0.66 | -0.5 |
659,655 | + | mdtO | MCAODC_03270 | 0.66 | -0.7 |
659,655 | + | mdtO | MCAODC_03270 | 0.66 | +0.7 |
659,655 | + | mdtO | MCAODC_03270 | 0.66 | +0.5 |
659,655 | + | mdtO | MCAODC_03270 | 0.66 | -1.5 |
659,655 | + | mdtO | MCAODC_03270 | 0.66 | -1.7 |
659,656 | - | mdtO | MCAODC_03270 | 0.66 | +0.4 |
659,656 | - | mdtO | MCAODC_03270 | 0.66 | +0.1 |
659,656 | - | mdtO | MCAODC_03270 | 0.66 | -0.1 |
659,656 | - | mdtO | MCAODC_03270 | 0.66 | -2.0 |
659,657 | + | mdtO | MCAODC_03270 | 0.66 | -0.4 |
659,721 | + | mdtO | MCAODC_03270 | 0.69 | +1.1 |
659,722 | - | mdtO | MCAODC_03270 | 0.69 | -1.3 |
659,722 | - | mdtO | MCAODC_03270 | 0.69 | +0.5 |
659,757 | - | mdtO | MCAODC_03270 | 0.71 | +0.0 |
659,790 | + | mdtO | MCAODC_03270 | 0.73 | -0.5 |
659,791 | - | mdtO | MCAODC_03270 | 0.73 | +0.7 |
659,856 | - | mdtO | MCAODC_03270 | 0.76 | -0.0 |
659,860 | + | mdtO | MCAODC_03270 | 0.76 | -0.2 |
659,860 | + | mdtO | MCAODC_03270 | 0.76 | -1.3 |
659,861 | - | mdtO | MCAODC_03270 | 0.76 | +0.2 |
659,861 | - | mdtO | MCAODC_03270 | 0.76 | +0.2 |
659,864 | + | mdtO | MCAODC_03270 | 0.76 | -1.0 |
659,864 | + | mdtO | MCAODC_03270 | 0.76 | -0.4 |
659,864 | + | mdtO | MCAODC_03270 | 0.76 | +1.3 |
659,864 | + | mdtO | MCAODC_03270 | 0.76 | -0.7 |
659,865 | - | mdtO | MCAODC_03270 | 0.76 | +0.1 |
659,865 | - | mdtO | MCAODC_03270 | 0.76 | -1.8 |
659,865 | - | mdtO | MCAODC_03270 | 0.76 | -0.5 |
659,869 | + | mdtO | MCAODC_03270 | 0.76 | -0.2 |
659,870 | - | mdtO | MCAODC_03270 | 0.76 | +1.1 |
659,870 | - | mdtO | MCAODC_03270 | 0.76 | +0.1 |
659,914 | - | mdtO | MCAODC_03270 | 0.79 | -1.1 |
659,914 | - | mdtO | MCAODC_03270 | 0.79 | -0.2 |
659,914 | - | mdtO | MCAODC_03270 | 0.79 | +1.0 |
659,914 | - | mdtO | MCAODC_03270 | 0.79 | +0.2 |
659,928 | - | mdtO | MCAODC_03270 | 0.79 | -0.4 |
659,929 | + | mdtO | MCAODC_03270 | 0.79 | +0.7 |
659,930 | - | mdtO | MCAODC_03270 | 0.79 | +0.1 |
659,930 | - | mdtO | MCAODC_03270 | 0.79 | -1.4 |
659,948 | + | mdtO | MCAODC_03270 | 0.80 | -1.4 |
660,016 | + | mdtO | MCAODC_03270 | 0.84 | -1.3 |
660,017 | - | mdtO | MCAODC_03270 | 0.84 | -1.8 |
660,017 | - | mdtO | MCAODC_03270 | 0.84 | -0.7 |
660,115 | + | mdtO | MCAODC_03270 | 0.88 | -0.1 |
660,116 | - | mdtO | MCAODC_03270 | 0.88 | -0.2 |
660,116 | - | mdtO | MCAODC_03270 | 0.88 | +0.6 |
660,202 | + | +0.2 | |||
660,203 | - | +0.1 | |||
660,203 | - | +0.7 | |||
660,203 | - | +0.2 | |||
660,247 | + | -0.8 | |||
660,247 | + | +1.3 | |||
660,247 | + | -0.5 | |||
660,247 | + | -1.4 | |||
660,247 | + | -1.0 | |||
660,248 | - | -0.5 | |||
660,248 | - | +0.2 | |||
660,251 | - | +0.4 | |||
660,429 | + | -0.8 | |||
660,490 | + | +0.1 | |||
660,490 | + | -1.3 | |||
660,490 | + | -1.3 | |||
660,490 | + | -0.3 | |||
660,491 | - | -0.1 | |||
660,491 | - | -0.3 | |||
660,491 | - | -1.1 | |||
660,579 | + | mdtP | MCAODC_03275 | 0.16 | -0.9 |
660,580 | - | mdtP | MCAODC_03275 | 0.16 | -0.4 |
660,648 | + | mdtP | MCAODC_03275 | 0.20 | +1.0 |
660,666 | + | mdtP | MCAODC_03275 | 0.22 | -2.4 |
660,666 | + | mdtP | MCAODC_03275 | 0.22 | +0.8 |
660,723 | + | mdtP | MCAODC_03275 | 0.25 | +0.0 |
660,724 | - | mdtP | MCAODC_03275 | 0.25 | -0.5 |
660,770 | + | mdtP | MCAODC_03275 | 0.29 | +1.5 |
660,771 | - | mdtP | MCAODC_03275 | 0.29 | +2.1 |
660,771 | - | mdtP | MCAODC_03275 | 0.29 | +1.1 |
660,773 | + | mdtP | MCAODC_03275 | 0.29 | +1.3 |
660,773 | + | mdtP | MCAODC_03275 | 0.29 | +0.1 |
660,773 | + | mdtP | MCAODC_03275 | 0.29 | +0.8 |
660,774 | - | mdtP | MCAODC_03275 | 0.29 | -0.7 |
660,774 | - | mdtP | MCAODC_03275 | 0.29 | -0.2 |
660,775 | + | mdtP | MCAODC_03275 | 0.29 | -0.3 |
660,775 | + | mdtP | MCAODC_03275 | 0.29 | +2.8 |
660,776 | - | mdtP | MCAODC_03275 | 0.29 | -1.1 |
660,776 | - | mdtP | MCAODC_03275 | 0.29 | -0.5 |
660,866 | - | mdtP | MCAODC_03275 | 0.35 | -1.3 |
660,895 | - | mdtP | MCAODC_03275 | 0.37 | +0.2 |
660,895 | - | mdtP | MCAODC_03275 | 0.37 | +0.2 |
660,930 | - | mdtP | MCAODC_03275 | 0.40 | -0.4 |
660,932 | + | mdtP | MCAODC_03275 | 0.40 | +0.4 |
660,932 | + | mdtP | MCAODC_03275 | 0.40 | +3.4 |
660,932 | + | mdtP | MCAODC_03275 | 0.40 | -0.0 |
660,933 | - | mdtP | MCAODC_03275 | 0.40 | +0.5 |
660,933 | - | mdtP | MCAODC_03275 | 0.40 | -0.9 |
660,937 | + | mdtP | MCAODC_03275 | 0.40 | +1.0 |
660,937 | + | mdtP | MCAODC_03275 | 0.40 | -0.5 |
660,951 | - | mdtP | MCAODC_03275 | 0.41 | +1.3 |
661,018 | + | mdtP | MCAODC_03275 | 0.46 | +0.9 |
661,105 | + | mdtP | MCAODC_03275 | 0.51 | +1.6 |
661,168 | + | mdtP | MCAODC_03275 | 0.56 | +0.1 |
661,233 | - | mdtP | MCAODC_03275 | 0.60 | -0.0 |
661,233 | - | mdtP | MCAODC_03275 | 0.60 | -0.3 |
661,277 | + | mdtP | MCAODC_03275 | 0.63 | +0.2 |
661,278 | - | mdtP | MCAODC_03275 | 0.63 | -1.5 |
661,278 | - | mdtP | MCAODC_03275 | 0.63 | +0.2 |
661,293 | + | mdtP | MCAODC_03275 | 0.64 | +2.1 |
661,294 | - | mdtP | MCAODC_03275 | 0.64 | -0.9 |
661,294 | - | mdtP | MCAODC_03275 | 0.64 | +0.5 |
661,294 | - | mdtP | MCAODC_03275 | 0.64 | -0.3 |
661,294 | - | mdtP | MCAODC_03275 | 0.64 | +0.1 |
661,326 | - | mdtP | MCAODC_03275 | 0.67 | -0.7 |
661,339 | + | mdtP | MCAODC_03275 | 0.67 | -0.4 |
Or see this region's nucleotide sequence