Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5850

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
50,636	-		GFF5849	0.32	+1.1
50,704	+		GFF5849	0.38	+0.4
50,705	-		GFF5849	0.38	+0.4
50,726	+		GFF5849	0.40	-0.3
50,726	+		GFF5849	0.40	-0.0
50,727	-		GFF5849	0.40	+0.6
50,727	-		GFF5849	0.40	+0.1
50,737	+		GFF5849	0.41	-0.3
50,738	-		GFF5849	0.41	-0.0
50,738	-		GFF5849	0.41	+0.1
50,738	-		GFF5849	0.41	+1.0
50,738	-		GFF5849	0.41	-0.8
50,746	+		GFF5849	0.42	+0.3
50,747	-		GFF5849	0.42	+1.0
50,866	-		GFF5849	0.52	-0.8
51,201	-		GFF5849	0.81	-0.3
51,201	-		GFF5849	0.81	-0.3
51,423	-				+1.1
51,481	-				-0.4
51,481	-				+1.3
51,507	-				+0.4
51,685	-		GFF5850	0.23	-0.4
51,685	-		GFF5850	0.23	+0.5
51,890	+		GFF5850	0.41	-0.0
51,890	+		GFF5850	0.41	-0.3
51,891	-		GFF5850	0.41	+0.3
51,891	-		GFF5850	0.41	+0.3
51,921	+		GFF5850	0.44	+0.7
51,921	+		GFF5850	0.44	-0.1
51,921	+		GFF5850	0.44	-0.2
51,922	-		GFF5850	0.44	+0.7
52,017	+		GFF5850	0.52	-0.6
52,017	+		GFF5850	0.52	-0.2
52,017	+		GFF5850	0.52	-0.0
52,018	-		GFF5850	0.52	+0.8
52,018	-		GFF5850	0.52	+0.5
52,044	+		GFF5850	0.54	-0.5
52,044	+		GFF5850	0.54	-1.0
52,044	+		GFF5850	0.54	+0.0
52,044	+		GFF5850	0.54	-0.2
52,044	+		GFF5850	0.54	-0.8
52,045	-		GFF5850	0.54	-0.4
52,045	-		GFF5850	0.54	-0.1
52,045	-		GFF5850	0.54	+0.2
52,045	-		GFF5850	0.54	-0.2
52,045	-		GFF5850	0.54	+0.2
52,045	-		GFF5850	0.54	-0.1
52,141	+		GFF5850	0.63	-0.2
52,141	+		GFF5850	0.63	+0.2
52,141	+		GFF5850	0.63	+0.6
52,141	+		GFF5850	0.63	+0.4
52,141	+		GFF5850	0.63	+0.5
52,141	+		GFF5850	0.63	+0.2
52,142	-		GFF5850	0.63	-0.3
52,198	-		GFF5850	0.68	+0.3
52,272	+		GFF5850	0.74	+0.3
52,273	-		GFF5850	0.74	+0.2
52,273	-		GFF5850	0.74	+0.2
52,273	-		GFF5850	0.74	-0.6
52,273	-		GFF5850	0.74	+0.0
52,273	-		GFF5850	0.74	+0.6
52,273	-		GFF5850	0.74	-0.4
52,351	-		GFF5850	0.81	+0.3
52,351	-		GFF5850	0.81	+0.8
52,407	+		GFF5850	0.86	+0.2
52,481	-				+0.6
52,494	+				+0.3
52,494	+				+0.7
52,494	+				+0.1
52,494	+				-0.8
52,495	-				-0.2
52,495	-				+0.6
52,495	-				-0.4
52,495	-				+0.2
52,495	-				-0.2
52,495	-				-0.4
52,495	-				-0.7
52,495	-				+1.5
52,495	-				+0.2
52,588	-				+0.3
52,588	-				+0.6
52,634	+				+0.9
52,634	+				+0.5
52,634	+				+1.0
52,634	+				+0.0
52,635	-				-0.8
52,635	-				-0.1
52,635	-				-0.1
52,688	+				+0.5
52,689	-				-0.0
52,708	+				-0.5
52,708	+				-0.0
52,709	-				-1.1
52,721	-				-0.6
52,792	+				+0.9
52,793	-				+0.2
52,793	-				-0.3
52,897	+				-2.3
52,898	-				-0.5
52,898	-				+0.6
52,950	+				-0.1
53,006	+				+0.7
53,007	-				+0.5
53,007	-				-0.0
53,007	-				-0.4
53,007	-				+1.3
53,021	+				+0.2
53,021	+				-0.1
53,057	-				-2.2
53,077	+				-0.5
53,276	+				+1.7
53,449	-				-0.0
53,449	-				+0.5
53,468	+				+0.2
53,469	-				+0.8
53,497	+				-1.1
53,497	+				-0.4
53,497	+				-0.6
53,498	-				+1.1
53,498	-				-0.8
53,511	+				-0.7
53,511	+				+0.1
53,512	-				+1.3
53,512	-				+1.5
53,513	-				-0.0