Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5822

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
15,011	-		GFF5820	0.65	+0.5
15,291	-				+0.3
15,391	+				+1.0
15,724	+		GFF5821	0.70	-0.1
15,724	+		GFF5821	0.70	-0.7
16,420	+		GFF5822	0.28	-1.5
16,420	+		GFF5822	0.28	-0.9
16,430	-		GFF5822	0.29	-0.7
16,435	+		GFF5822	0.29	-0.6
16,435	+		GFF5822	0.29	-0.9
16,436	-		GFF5822	0.29	-0.6
16,585	+		GFF5822	0.37	+0.0
16,586	-		GFF5822	0.37	-0.3
16,586	-		GFF5822	0.37	-0.2
16,586	-		GFF5822	0.37	-0.4
16,661	-		GFF5822	0.41	-1.6
16,692	+		GFF5822	0.42	+0.2
16,792	+		GFF5822	0.47	+0.0
16,792	+		GFF5822	0.47	-0.3
17,027	-		GFF5822	0.60	-0.0
18,579	-				-0.4
18,579	-				+0.6
18,579	-				+1.1