Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5635

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
2,655,364	-		GFF5634	0.24	-1.4
2,655,807	+		GFF5634	0.62	+0.2
2,655,807	+		GFF5634	0.62	-0.9
2,655,825	+		GFF5634	0.63	+0.2
2,655,831	+		GFF5634	0.64	+0.1
2,655,831	+		GFF5634	0.64	+0.1
2,655,831	+		GFF5634	0.64	-0.2
2,655,850	-		GFF5634	0.65	-0.1
2,656,491	+		GFF5635	0.12	-1.2
2,657,358	+		GFF5635	0.59	+0.6
2,657,520	+		GFF5635	0.68	+2.6
2,657,773	-		GFF5635	0.81	-2.2
2,657,773	-		GFF5635	0.81	+0.3
2,658,953	-				-0.2