Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5470

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
2,471,290	+				-0.4
2,471,291	-				-1.8
2,471,291	-				-0.9
2,471,293	+				+0.3
2,471,293	+				+1.0
2,471,293	+				-0.7
2,471,294	-				-0.4
2,471,551	+		GFF5469	0.33	-0.9
2,471,551	+		GFF5469	0.33	+0.1
2,471,551	+		GFF5469	0.33	-1.6
2,471,551	+		GFF5469	0.33	-0.6
2,471,552	-		GFF5469	0.33	+0.4
2,471,729	-		GFF5469	0.55	+0.5
2,471,729	-		GFF5469	0.55	+0.2
2,471,756	-		GFF5469	0.58	-0.8
2,471,807	-		GFF5469	0.65	-1.0
2,471,821	+		GFF5469	0.66	+0.8
2,471,822	-		GFF5469	0.66	-0.4
2,471,827	+		GFF5469	0.67	+0.4
2,471,917	+		GFF5469	0.78	-0.7
2,472,103	+				+0.5
2,472,324	+				+0.8
2,472,324	+				-0.4
2,472,513	+		GFF5470	0.20	+0.4
2,472,513	+		GFF5470	0.20	+0.5
2,472,514	-		GFF5470	0.20	+1.0
2,472,514	-		GFF5470	0.20	+0.6
2,472,514	-		GFF5470	0.20	+0.1
2,472,613	-		GFF5470	0.26	-0.2
2,472,807	+		GFF5470	0.38	+0.9
2,472,807	+		GFF5470	0.38	-1.4
2,472,873	+		GFF5470	0.43	+0.3
2,472,874	-		GFF5470	0.43	+1.2
2,472,915	+		GFF5470	0.45	-0.0
2,472,985	-		GFF5470	0.50	+0.3
2,473,084	-		GFF5470	0.56	-0.3
2,473,087	-		GFF5470	0.56	-0.1
2,473,351	-		GFF5470	0.73	-0.0
2,473,437	+		GFF5470	0.79	-0.3
2,473,597	+		GFF5470	0.89	-0.1
2,473,975	-		GFF5471	0.17	-1.4
2,474,023	-		GFF5471	0.20	-0.3
2,474,023	-		GFF5471	0.20	-0.4
2,474,119	-		GFF5471	0.28	+0.2
2,474,119	-		GFF5471	0.28	+0.4
2,474,344	-		GFF5471	0.45	-0.5