Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5149

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
2,157,877	-		GFF5148	0.36	+0.3
2,157,964	-		GFF5148	0.46	-0.1
2,157,964	-		GFF5148	0.46	-0.0
2,158,336	-		GFF5148	0.90	+0.5
2,158,336	-		GFF5148	0.90	-0.1
2,158,389	+				-1.0
2,158,390	-				+0.2
2,158,527	+				+0.7
2,158,527	+				-0.0
2,158,527	+				-0.5
2,158,528	-				+1.5
2,159,463	+		GFF5149	0.38	+0.3
2,159,463	+		GFF5149	0.38	+0.2
2,161,196	+				-0.3
2,161,196	+				+0.3
2,161,196	+				+0.4
2,161,196	+				+0.8
2,161,196	+				+0.1
2,161,196	+				+0.4
2,161,196	+				+0.3
2,161,196	+				+0.1
2,161,197	-				-0.7
2,161,197	-				-0.4
2,161,197	-				+1.3
2,161,545	+				-0.3
2,162,100	+		GFF5150	0.23	-0.3
2,162,100	+		GFF5150	0.23	-0.0
2,162,101	-		GFF5150	0.23	-0.1