Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF445

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
113,769	+		GFF444	0.43	-0.1
113,770	-		GFF444	0.43	-0.7
113,770	-		GFF444	0.43	+0.0
113,856	+		GFF444	0.52	+0.5
113,895	+		GFF444	0.56	+0.5
113,955	+		GFF444	0.62	-0.7
114,001	-		GFF444	0.66	+1.1
114,153	+		GFF444	0.82	-1.4
114,408	+				-0.9
114,409	-				-0.2
114,579	+		GFF445	0.11	+0.1
114,580	-		GFF445	0.11	-0.7
114,906	+		GFF445	0.28	+0.6
115,539	+		GFF445	0.62	+1.9
116,325	+		GFF446	0.60	-0.3
116,326	-		GFF446	0.61	-1.7
116,326	-		GFF446	0.61	-0.1
116,453	-		GFF447	0.14	-0.3
116,511	+		GFF447	0.21	-0.1
116,511	+		GFF447	0.21	+1.0
116,512	-		GFF447	0.21	-0.4
116,512	-		GFF447	0.21	-0.8
116,874	+		GFF447	0.66	-0.8
116,997	+		GFF447	0.82	+0.4
117,054	+		GFF447	0.89	-1.3
117,164	+				-0.3
117,165	-				+0.2
117,165	-				+0.0