Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3057

Experiment: Ying_Nucleobase14 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 1
135,713	-		GFF3056	0.40	+0.0
136,072	+		GFF3056	0.66	-0.1
136,073	-		GFF3056	0.66	+0.4
136,402	+				-0.5
136,402	+				+0.2
137,012	-		GFF3057	0.44	+0.1
137,281	+		GFF3057	0.72	+0.8
137,282	-		GFF3057	0.72	+0.0
137,405	-		GFF3057	0.84	-0.2
137,461	+				-0.8
137,462	-				+0.1
137,483	-				+0.0
137,609	-				-0.1
137,857	+		GFF3058	0.21	+0.1
137,858	-		GFF3058	0.21	-0.7
138,117	+		GFF3058	0.49	-0.0
138,118	-		GFF3058	0.49	+0.3
138,118	-		GFF3058	0.49	+0.1
138,118	-		GFF3058	0.49	-0.3